solitarius-mcp

solitarius-mcp is a plugin for Claude Code from pregHosh/Solitarius-mcp. Its manifest loads nothing; the 7 skills, 1 MCP server it bundles cost 269 tokens per session together, scanned A, original, Apache-2.0.

A plugin package that connects coding agents to REINVENT4 molecular-design tools. REINVENT4 generates and evaluates chemical structures, and the package includes workflows such as sampling, fine-tuning, reinforcement learning, and analysis.

In plain words
What is it for?
Running molecule generation, transfer learning, scored optimization, custom scoring, and generated-molecule analysis through MCP tools.
Why use it?
It groups the project’s chemistry tools and instructions in one add-on. The GPU Docker container must be built and started before the tools can work.

Plugin for Claude Code

Written for Claude Code: a Claude Code plugin manifest.

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Claude Code
/plugin marketplace add pregHosh/Solitarius-mcp
agentmods
npx agentmods add plugins/preghosh/solitarius-mcp/solitarius-mcp
Clone the repo
git clone --depth 1 https://github.com/pregHosh/Solitarius-mcp

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for solitarius-mcp

README.md
[![agentmods](https://agentmods.dev/badge/plugins/preghosh/solitarius-mcp/solitarius-mcp.svg)](https://agentmods.dev/plugins/preghosh/solitarius-mcp/solitarius-mcp)
Your own site
<a href="https://agentmods.dev/plugins/preghosh/solitarius-mcp/solitarius-mcp"><img src="https://agentmods.dev/badge/plugins/preghosh/solitarius-mcp/solitarius-mcp.svg" alt="Measured on agentmods" height="20"></a>
Per session not measured What this adds to a session before it is invoked.
When invoked not measured The manifest loads nothing itself; its 7 skills, 1 MCP server cost 269 tokens a session between them.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Security

Grade A, and why

solitarius-mcp scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 5d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude-plugin/plugin.json · 23 lines

What it actually says

{
  "name": "solitarius-mcp",
  "description": "REINVENT4 de novo molecular design as MCP tools — sampling, transfer learning, staged RL with interactive scoring-function design, custom scoring components, and generated-molecule analysis. PREREQUISITE: build and start the GPU Docker container first (see README) — without it the tools load but every call fails.",
  "version": "0.1.0",
  "author": {
    "name": "pregHosh",
    "url": "https://github.com/pregHosh"
  },
  "homepage": "https://github.com/pregHosh/Solitarius-mcp",
  "repository": "https://github.com/pregHosh/Solitarius-mcp",
  "license": "Apache-2.0",
  "keywords": [
    "reinvent4",
    "molecular-design",
    "de-novo-design",
    "generative-chemistry",
    "drug-discovery",
    "cheminformatics",
    "reinforcement-learning",
    "rdkit"
  ]
}
Contents

What it installs

The manifest is a name and a version. 7 skills, 1 MCP server travel with it, and installing the plugin installs all of them — 269 tokens a session between them. Each is measured on its own page, and each can be installed alone.

Files

What ships with it

1 file beside plugin.json in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 5d ago First seen · 23 lines scan A f118ab7b396f

Subscribe to this mod's changes

solitarius-mcp is a plugin published in the GitHub repository pregHosh/Solitarius-mcp (0 stars, last pushed 27d ago), licensed Apache-2.0. Its token cost is not measured: this kind of file is read by the harness, not the model. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.