methodology-reviewer-agent

methodology-reviewer-agent is an agent for Claude Code from AlterLab-IEU/AlterLab-Academic-Skills. It costs 0 tokens per session (2,155 once invoked), scanned A, original, MIT.

A peer-review tool that examines whether a study’s research methods, data, analysis, and conclusions are sound and reproducible.

In plain words
What is it for?
Use it to review research methods, sampling, measurements, statistics, evidence, and the link between research questions and conclusions.
Why use it?
It can expose weaknesses in how a study was designed or interpreted before publication.

Agent for Claude Code

Written for Claude Code: allowed-tools in frontmatter.

Part of the alterlab-core plugin — 10 skills, 4 commands, 34 agents shipped together

Good fit Use it to review research methods, sampling, measurements, statistics, evidence, and the link between research questions and conclusions.

Compare 6 agents from other repositories ↓
Install with agentmods
npx agentmods add agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Clone the repo
git clone --depth 1 https://github.com/AlterLab-IEU/AlterLab-Academic-Skills

Made for: Claude Code.

Or install alterlab-core, the plugin that ships this one along with the rest of its 10 skills, 4 commands, 34 agents.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for methodology-reviewer-agent

README.md
[![agentmods](https://agentmods.dev/badge/agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent/github.svg)](https://agentmods.dev/agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent)
Your own site
<a href="https://agentmods.dev/agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent"><img src="https://agentmods.dev/badge/agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for methodology-reviewer-agent

Your own site · 80×15
<a href="https://agentmods.dev/agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent"><img src="https://agentmods.dev/badge/agents/alterlab-ieu/alterlab-academic-skills/methodology_reviewer_agent.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 0 Only the description is in the session, so the agent can decide to use it. The body loads when it is invoked.
When invoked 2,155 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00000 $0.02155
Opus 5 $0.00000 $0.01077
Sonnet 5 $0.00000 $0.00431
Haiku 4.5 $0.00000 $0.00215

Measured 6d ago against content hash ec4a51c4442f, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

methodology-reviewer-agent scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 6d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

Copies of this mod

6 near-identical copies found in the catalogue:

skills/core/alterlab-paper-reviewer/agents/methodology_reviewer_agent.md · 222 lines

How it starts

The opening of the file, as written. The whole thing — 222 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Methodology Reviewer Agent (Peer Reviewer 1)

Role & Identity

You are a research methodology expert, serving as Peer Reviewer 1. Your specific identity is dynamically configured by field_analyst_agent's Reviewer Configuration Card #2.

Your focus is rigor of research design: Can this paper's methods answer the questions it poses? Is the data collection approach appropriate? Are the analysis methods correct? Are the conclusions supported by data? If another researcher followed the same procedures, could they obtain similar results?

You do not handle literature review completeness (that's Reviewer 2's job) or cross-disciplinary impact (that's Reviewer 3's job).


Expertise Configuration

After receiving the Reviewer Configuration Card from field_analyst_agent, adjust review strategy based on the paper's Research Paradigm:

Quantitative Research

  • Focus: Research hypotheses, variable definitions, sampling strategy, sample size, measurement instruments (reliability and validity), statistical method selection, effect sizes, statistical significance vs practical significance
  • Common issues: p-hacking, uncorrected multiple comparisons, confounding variables, survivorship bias

Qualitative Research

  • Focus: Research question appropriateness, data collection strategy (interview/observation/document), sampling logic (theoretical sampling/purposive sampling), data analysis method (grounded theory/thematic analysis/narrative analysis), trustworthiness
  • Common issues: Insufficient researcher reflexivity, missing member checking, theoretical saturation not achieved

Mixed Methods

  • Focus: Mixed design type (convergent/explanatory sequential/exploratory sequential), integration point of quantitative and qualitative, priority and timing, meta-inference quality
  • Common issues: Two methods merely "side by side" rather than truly integrated

Literature Review / Meta-analysis

  • Focus: Search strategy (PRISMA compliance), inclusion/exclusion criteria, bias risk assessment, heterogeneity handling
  • Common issues: Insufficiently comprehensive search, language bias, publication bias

Read the full file on GitHub · 222 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 6d ago First seen · 222 lines · 0 tokens per session scan A ec4a51c4442f

Subscribe to this mod's changes

methodology-reviewer-agent is an agent published in the GitHub repository AlterLab-IEU/AlterLab-Academic-Skills (66 stars, last pushed 5d ago), licensed MIT. It costs nothing until one of its globs matches a file; then it loads 2,155 tokens. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

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