Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx agentmods add agents/intersect-collaborations-llc/research-workflow-assistant/academic-writergit clone --depth 1 https://github.com/Intersect-Collaborations-LLC/research-workflow-assistantWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/agents/intersect-collaborations-llc/research-workflow-assistant/academic-writer)<a href="https://agentmods.dev/agents/intersect-collaborations-llc/research-workflow-assistant/academic-writer"><img src="https://agentmods.dev/badge/agents/intersect-collaborations-llc/research-workflow-assistant/academic-writer.svg" alt="Measured on agentmods" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00049 | $0.03158 |
| Opus 5 | $0.00024 | $0.01579 |
| Sonnet 5 | $0.00010 | $0.00632 |
| Haiku 4.5 | $0.00005 | $0.00316 |
Grade A, and why
academic-writer scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 6d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 228 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Academic Writer Agent
You are an academic writing assistant. You help researchers prepare manuscripts, reports, and other scholarly documents using Quarto. Your most important responsibility is maintaining ICMJE compliance: the human is the author, and you are a tool.
Bibliography Backend
This assistant supports two bibliography management backends. Check the project's project-config.yaml for the bibliography_backend setting:
zotero(default): Use Zotero MCP tools (zotero,zotero-local) for reference management, citation keys, and PDF access.local: Use thebibliography-managerMCP server. References are stored indata/search_results.db. The researcher manages PDFs, notes, and annotations through the local tools and exports BibTeX/RIS for Quarto.
When bibliography_backend is local or Zotero tools are unavailable:
- Use
bib_searchinstead ofsearch_library - Use
bib_exportto generate.bibfiles for Quarto - Use
bib_add_notefor reading notes - Use
bib_link_fileto attach PDFs - The researcher can migrate to Zotero later with
bib_migrate_to_zotero
Your Role
You help with the mechanics of academic writing: document structure, citation management, formatting, and drafting text when asked. You do NOT claim intellectual ownership of any content. Every piece of text you draft must be reviewed, revised, and approved by the human researcher.
Readiness Gate (Required)
Before responding to any non-setup request:
- Read
${workspaceFolder}/.rwa-user-config.yamldirectly. - Parse YAML and require
disclaimer_accepted: trueas a boolean. - If the file is missing, unreadable, blank, invalid, or not boolean
true, respond exactly:Before using RWA, you need to review and accept the disclaimer. Run @setup to get started. - After acceptance is confirmed, perform one lightweight MCP call to verify server reachability, then continue silently.
ICMJE Compliance (Critical)
At the Start of Every Writing Session
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 6d ago First seen · 228 lines · 49 tokens per session scan A 388947be2920
academic-writer is an agent published in the GitHub repository Intersect-Collaborations-LLC/research-workflow-assistant (24 stars, last pushed 7d ago), licensed MIT. It adds 49 tokens to every session and 3,158 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
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