Open-source AI research assistant for VS Code + GitHub Copilot. Connects to PubMed, OpenAlex, Semantic Scholar, Europe PMC, CrossRef, and Zotero via MCP servers. Custom agents guide systematic reviews, academic writing, data analysis, and project management — all ICMJE-compliant with full audit trails.
These files are Intersect-Collaborations-LLC/research-workflow-assistant's own configuration. They tell Claude Code and GitHub Copilot how to work on this repository, so they are not mods to install elsewhere. Copy one as a starting point and replace the parts that are about this project.
.github/copilot-instructions.md A 7,170 tok .github/agents/academic-writer.agent.md A 49 tok .github/agents/critical-reviewer.agent.md A 51 tok .github/agents/data-analyst.agent.md A 43 tok .github/agents/developer.agent.md A 51 tok .github/agents/project-manager.agent.md A 38 tok .github/agents/release-manager.agent.md A 52 tok .github/agents/research-orchestrator.agent.md A 37 tok .github/agents/research-planner.agent.md A 33 tok .github/agents/setup.agent.md A 45 tok .github/agents/systematic-reviewer.agent.md A 55 tok .github/agents/troubleshooter.agent.md A 44 tok .github/agents/verification-coordinator.agent.md A 32 tok