Scientific instructions files

515 tagged Scientific, measured the same way as everything else here.

Browse within: bioinformatics 28model-context-protocol 15machine-learning 13cyanheads 12genomics 11drug-discovery 9Cheminformatics 7academic-writing 7ai-tools 7LaTeX 6claude-plugin 6ai-research 5astronomy 5calculator 5

aeren23/image-processing-skills

Instructions file CodexOpenCode

Instructions for aeren23/image-processing-skills, covering image processing skills — agent instructions, how to use these skills, key conventions and skill loading priority.

not rated 5 3mo ago A 324 tokens original MIT

wafermap AGENTS.md

196

wafertools/wafermap

Instructions file CodexOpenCode

Instructions for wafertools/wafermap, covering wafermap — rules for ai coding agents, wafermap — usage rules, entry points, traps that produce silently wrong maps and api facts that are easy to guess wrong.

not rated 5 7d ago A 2,904 tokens original MIT

slop-index AGENTS.md

198

hgaddipati1118/slop-index

Instructions file CodexOpenCode

Instructions for hgaddipati1118/slop-index, covering agents.md, reproduce the slop index end to end, repo layout, 0. environment, 1. (optional) rebuild the human baselines and 2. generate model outputs.

not rated 5 1mo ago A 1,978 tokens original MIT

braina GEMINI.md

199

brainets/braina

Instructions file Gemini CLI

Instructions for brainets/braina, covering project: braina (brain interaction analysis), 1. project context & purpose, 2. commands, verify environment (all core dependencies) and run the verification test suite for frites + hoi.

not rated 5 3mo ago A 1,269 tokens original BSD-3-Clause

AWETrim AGENTS.md

200

awegroup/AWETrim

Instructions file CodexOpenCode

Instructions for awegroup/AWETrim, covering awetrim — agent context, what this repo is, module status, physics references and symbol ↔ code name table.

not rated 5 6d ago A 2,181 tokens original Apache-2.0

hermes-lab AGENTS.md

201

amenti-labs/hermes-lab

Instructions file CodexOpenCode

Instructions for amenti-labs/hermes-lab, covering hermes lab agent instructions, what this repo is, data root vs workspace, repo ingress and write rules.

not rated 5 5mo ago A 510 tokens original MIT