1,354 tagged Scientific, measured the same way as everything else here.
Browse within: mcp-server 332model-context-protocol 289pipeworx 189bioinformatics 56LLM 44agentic-ai 30ai-tools 24fastmcp 23llm-tools 22cyanheads 21arxiv 18climate 15healthcare 15health 14
MCP server Claude CodeCodexCursor +2
MCP server "pubmed-evidence" as configured in Tianyu-Qu/mcp-pubmed-evidence. Runs mcp_pubmed_evidence.server with python. Needs 1 environment variable to run.
surajinacademia/Fiji_imageJ_mcp
MCP server Claude CodeCodexCursor +2
Minimal MCP server for controlling Fiji/ImageJ through commands, IJM, Groovy, images, and results. Runs locally from the fiji-mcp-server Python package.
MCP server Claude CodeCodexCursor +2
FastMCP-based tool for writing prompts against data in the NMDC (National Microbiome Data Collaborative) database. Runs locally from the nmdc-mcp Python package.
MCP server Claude CodeCodexCursor +2
NASA APOD MCP Service for Cursor IDE. Runs locally from the nasa-apod-mcp npm package.
MCP server Claude CodeCodexCursor +2
WeatherAPI MCP sunucusu - Hava durumu ve hava kalitesi verileri için MCP aracı. Runs locally from the @swonixs/weatherapi-mcp npm package.
MCP server Claude CodeCodexCursor +2
Simple VTK based visualization software. Runs locally from the viper Python package.
MCP server Claude CodeCodexCursor +2
A flexible arXiv search and analysis service with MCP protocol support. Runs locally from the arxiv-mcp-server Python package.
MCP server Claude CodeCodexCursor +2
Model Context Protocol server that surfaces UniProtKB data as MCP resources, tools, and prompts. Runs locally from the uniprot-mcp Python package.
MCP server Claude CodeCodexCursor +2
MCP server "chemmcp" as configured in cassiusoat/ChemMCPlite. Runs locally from the chemmcp Python package.
Joint-Photon-Sciences-Institute/xraylarch-mcp
MCP server Claude CodeCodexCursor +2
MCP server "xraylarch" as configured in Joint-Photon-Sciences-Institute/xraylarch-mcp. Runs xraylarch_mcp with python.
MCP server Claude CodeCodexCursor +2
MCP server for generating, scoring and embedding genomic sequences using Evo 2. Runs locally from the evo2_mcp Python package.
MCP server Claude CodeCodexCursor +2
Local stdio MCP server for PubMed with 10 tools: search, fetch, fetchbatch, getfulltext, count, findsimilararticles, exporttoris, getcitationcounts, convertids, batchprocess. Runs locally from the pubmed_mcp_server2 npm package.
MCP server Claude CodeCodexCursor +2
MCP server "snotel-mcp-server" as configured in jymmyt/snotel-mcp-server. Runs locally from the snotel-mcp-server Python package.
MCP server Claude CodeCodexCursor +2
Natural language interface for CNV inference from scRNA-Seq data with infercnvpy through MCP. Runs locally from the infercnv-mcp Python package.
MCP server Claude CodeCodexCursor +2
MCP server exposing PaperQA2 for deep synthesis across scientific papers. Runs locally from the paperqa-mcp-server Python package.
MCP server Claude CodeCodexCursor +2
SymPy sandbox MCP server based on FastMCP. Runs locally from the sym-mcp Python package.
MCP server Claude CodeCodexCursor +2
MCP server for executing Python on Google Colab GPU/TPU runtimes — supports all Colab Pro accelerators (T4/L4/A100/H100/G4) with high-memory option and security hardening. Fork of mcp-server-colab-exec by Paritosh Dwivedi. Runs locally from the mcp-colab-gpu Python package.
MCP server Claude CodeCodexCursor +2
MCP server "mcp-nec2-antenna" as configured in RFingAdam/mcp-nec2-antenna. Runs locally from the mcp-nec2-antenna Python package.
MCP server Claude CodeCodexCursor +2
PydanticAI and MCP approaches for getting textual representations of scientific literature from PMIDs, DOIs, etc. Runs locally from the artl-mcp Python package.
MCP server Claude CodeCodexCursor +2
MCP that connects to wetlab protocol resources, including protocols.io. Runs locally from the protocol-mcp Python package.
NSF-Simons-CosmicAI-Institute/manna
MCP server Claude CodeCodexCursor +2
MANNA — MCP Architecture for NOIRLab and NRAO Archives. Runs locally from the manna-mcp Python package.
Sulcate-whipcord611/arxiv-reader-mcp
MCP server Claude CodeCodexCursor +2
A flexible arXiv search and analysis service with MCP protocol support. Runs locally from the arxiv-mcp-server Python package.
MCP server Claude CodeCodexCursor +2
MCP server for searching and accessing academic papers from 23+ sources. Runs locally from the @telagod/papermcp npm package.
MCP server Claude CodeCodexCursor +2
MCP server "chimerax-mcp-plus" as configured in N283T/chimerax-mcp-plus. Runs locally from the chimerax-mcp-plus Python package.