Scientific MCP servers

1,371 tagged Scientific, measured the same way as everything else here.

Browse within: mcp-server 350model-context-protocol 299pipeworx 189bioinformatics 59LLM 45agentic-ai 30ai-tools 26fastmcp 24llm-tools 23cyanheads 19arxiv 18climate 15healthcare 15fastapi 14

water-chemistry-mcp

265

puran-water/water-chemistry-mcp

MCP server Claude CodeCodexCursor +2

MCP server "water-chemistry-mcp" as configured in puran-water/water-chemistry-mcp. Launched with uv --directory . run python server.py. Needs 2 environment variables to run.

not rated 3 7mo ago A tokens not measured original MIT archived

solar-mcp

266

qso-graph/solar-mcp

MCP server Claude CodeCodexCursor +2

MCP server for solar indices and space weather — SFI, SSN, Kp, DSCOVR, alerts. Runs locally from the solar-mcp Python package.

not rated 3 2d ago A tokens not measured GPL-3.0

labmate-mcp

267

JonasRackl/labmate-mcp

MCP server Claude CodeCodexCursor +2

Your AI lab companion — 78 MCP tools from literature search to benchwork to publication. Runs locally from the labmate-mcp Python package. Needs 2 environment variables to run.

not rated 3 8mo ago A tokens not measured original MIT

petromcp

268

ameyxd/petromcp

MCP server Claude CodeCodexCursor +2

Local-first MCP server for petroleum data. Reads LAS well logs and DLIS files; SEG-Y and pump cards next. Runs locally from the petroleum-mcp Python package.

not rated 3 +1 2mo ago A tokens not measured original MIT

xraylarch

269

Joint-Photon-Sciences-Institute/xraylarch-mcp

MCP server Claude CodeCodexCursor +2

MCP server "xraylarch" as configured in Joint-Photon-Sciences-Institute/xraylarch-mcp. Runs xraylarch_mcp with python.

not rated 3 7d ago A tokens not measured original BSD-3-Clause

mcp-colab-gpu

270

mio-github/mcp-colab-gpu

MCP server Claude CodeCodexCursor +2

MCP server for executing Python on Google Colab GPU/TPU runtimes — supports all Colab Pro accelerators (T4/L4/A100/H100/G4) with high-memory option and security hardening. Fork of mcp-server-colab-exec by Paritosh Dwivedi. Runs locally from the mcp-colab-gpu Python package.

not rated 3 7mo ago A tokens not measured fork MIT

brahe-mcp

271

duncaneddy/brahe-mcp

MCP server Claude CodeCodexCursor +2

MCP server wrapping the Brahe astrodynamics library. Runs locally from the brahe-mcp Python package.

not rated 3 3mo ago A tokens not measured original MIT

agda-mcp

272

DreamLinuxer/agda-mcp

MCP server Claude CodeCodexCursor +2

MCP server "agda-mcp" as configured in DreamLinuxer/agda-mcp. Runs locally from the agda-mcp Python package.

not rated 3 7mo ago A tokens not measured

evident

273

Kaushalendra-Marcus/evident

MCP server Claude CodeCodexCursor +2

Effect size calculations for microbiome data. Runs locally from the evident Python package.

not rated 3 2mo ago A tokens not measured original Apache-2.0

axiom-math

275

tufantunc/axiom-advanced-math-mcp

MCP server Claude CodeCodexCursor +2

Exact symbolic math for LLMs: integrals, equations, matrices, and claim verification via Giac/Xcas. Runs locally from the axiom-math npm package.

not rated 3 3d ago A tokens not measured GPL-3.0

opendss-mcp-server

276

ahmedelshazly27/opendss-mcp-server

MCP server Claude CodeCodexCursor +2

Model Context Protocol server for EPRI's OpenDSS power system simulator - enabling AI-powered distribution system analysis. Runs locally from the opendss-mcp-server Python package.

not rated 3 12mo ago A tokens not measured original MIT

dataviz-mcp

277

SuMayaBee/DataViz-MCP

MCP server Claude CodeCodexCursor +2

DataViz MCP is a local Panel web server that executes Python code snippets and renders the resulting visualizations as live, interactive web pages. Runs locally from the dataviz-mcp Python package.

not rated 3 15d ago A tokens not measured original BSD-3-Clause

bhoonidhi-mcp

278

geovicco-dev/bhoonidhi-mcp

MCP server Claude CodeCodexCursor +2

MCP server exposing ISRO's Bhoonidhi EO portal to AI agents, over the bhoonidhi-downloader SDK. Runs locally from the bhoonidhi-mcp Python package.

not rated 3 changed 1mo ago A tokens not measured original MIT

live-ketcher-mcp

279

MALeitch/live-ketcher-mcp

MCP server Claude CodeCodexCursor +2

MCP server "live-ketcher-mcp" as configured in MALeitch/live-ketcher-mcp. Runs locally from the live-ketcher-mcp Python package.

not rated 3 2mo ago A tokens not measured original MIT

abaqus-mcp

280

rutwikg/abaqus-mcp

MCP server Claude CodeCodexCursor +2

MCP server for Abaqus/Standard FEA: builds models, runs jobs, and autonomously diagnoses and fixes solver failures. Runs locally from the abaqus-mcp Python package.

not rated 3 +1 1mo ago A tokens not measured AGPL-3.0

tigl-mcp

281

cmudrc/tigl-mcp

MCP server Claude CodeCodexCursor +2

An MCP around the TiGL library. Runs locally from the tigl-mcp Python package.

not rated 3 2d ago A tokens not measured original MIT

biomarker-mcp

282

scmcphub/biomarker-mcp

MCP server Claude CodeCodexCursor +2

Natural language interface for celltype marker query through MCP. Runs locally from the biomarker-mcp Python package.

not rated 3 1y ago A tokens not measured

ZiChenWang114514/cdxml-toolkit-community

MCP server Claude CodeCodexCursor +2

MCP server "cdxml-toolkit-community" as configured in ZiChenWang114514/cdxml-toolkit-community. Runs locally from the cdxml-toolkit-community Python package.

not rated 3 4d ago A tokens not measured original MIT archived

gromacs-mcp

284

Alierkn/gromacs-mcp

MCP server Claude CodeCodexCursor +2

Model Context Protocol server that drives a local GROMACS installation — build, solvate, ionize, run simulations in the background, and analyse trajectories from any MCP client. Runs locally from the gromacs-mcp Python package.

not rated 3 3mo ago A tokens not measured original MIT

ncbi_gene_mcp_client

285

mohammadnajeeb/ncbi_gene_mcp_client

MCP server Claude CodeCodexCursor +2

MCP server "ncbigenemcpclient" as configured in mohammadnajeeb/ncbigenemcpclient. Runs locally from the ncbi_gene_mcp_client Python package.

not rated 2 +1 1y ago A tokens not measured original MIT

cernion-energy-tools

286

energychain/cernion-energy-tools

MCP server Claude CodeCodexCursor +2

Energy-domain MCP tools for Cernion context, evidence and guarded process preparation. Remote server at api.cernion.de.

not rated 2 today A tokens not measured GPL-3.0

math-court

287

gaiaftcl-sudo/uum8dSolarResearch

MCP server Claude CodeCodexCursor +2

No-float UUM-8D Math Court. Integer courts and certified MCP. Floats refused. Remote server at affine.earth.

not rated 2 22d ago A tokens not measured

nebulamind

288

DuhoKim/NebulaMind

MCP server Claude CodeCodexCursor +2

AI astronomy wiki with open agent peer-review. Vote on evidence, propose edits, earn reputation. Runs locally from the @kuntori/nebulamind-mcp npm package. Needs 1 environment variable to run.

not rated 2 29d ago A tokens not measured original MIT