agentmods.dev

Scientific MCP servers

1,371 tagged Scientific, measured the same way as everything else here.

Browse within: mcp-server 350model-context-protocol 299pipeworx 189bioinformatics 59LLM 45agentic-ai 30ai-tools 26fastmcp 24llm-tools 23cyanheads 19arxiv 18climate 15healthcare 15fastapi 14

Sort RelevanceRecently updatedFewest tokensSecurity gradeRepo starsStars this weekTop rated 1,371 mods

google-health-mcp

25

davidmosiah/google-health-mcp

MCP server Claude CodeCodexCursor +2

Privacy-first unofficial Google Health API v4 MCP server for health, sleep, activity, HR agents. Runs locally from the google-health-mcp-unofficial npm package. Needs 8 environment variables to run.

not rated 72 +2 yesterday A tokens not measured original MIT

ols-mcp

26

monarch-initiative/dismech

MCP server Claude Code

One of 2 in .mcp.json

MCP for retrieving things from the Ontology Lookup Service. Runs locally from the ols-mcp Python package.

not rated 69 today A tokens not measured original BSD-3-Clause

pyomop

27

dermatologist/pyomop

MCP server Claude CodeCodexCursor +2

OMOP CDM utils in Python. Runs locally from the pyomop Python package.

not rated 67 3d ago A tokens not measured GPL-3.0

arcgis

28

nicogis/MCP-Server-ArcGIS-Pro-AddIn

MCP server Claude CodeCodexCursor +2

MCP server "arcgis" as configured in nicogis/MCP-Server-ArcGIS-Pro-AddIn. Launched with dotnet run --project McpServer/ArcGisMcpServer/ArcGisMcpServer.csproj.

not rated 53 2mo ago A tokens not measured original MIT

openevidence-mcp

29

bakhtiersizhaev/openevidence-mcp

MCP server Claude CodeCodexCursor +2

Unofficial MCP server connecting OpenEvidence to AI agents via authenticated browser sessions. Runs locally from the openevidence-mcp npm package. Needs 1 environment variable to run.

not rated 48 +3 1mo ago A tokens not measured original Apache-2.0

chatspatial

30

cafferychen777/ChatSpatial

MCP server Claude CodeCodexCursor +2

ChatSpatial: Natural language-driven spatial transcriptomics analysis via Model Context Protocol (MCP) integration. Runs locally from the chatspatial Python package.

not rated 45 4d ago A tokens not measured original MIT

lean-lsp

31

Stavan-Jain/QECLean

MCP server Claude CodeCodexCursor +2

Lean Theorem Prover MCP. Runs locally from the lean-lsp-mcp Python package.

not rated 45 +1 yesterday A tokens not measured original Apache-2.0

origin-pro-mcp

32

youngminsw/Origin-Pro-MCP

MCP server Claude CodeCodexCursor +2

MCP server for controlling OriginLab Origin Pro via COM automation. Runs locally from the origin-pro-mcp Python package.

not rated 45 3mo ago A tokens not measured original MIT

literatur-mcp

33

saidsurucu/literatur-mcp

MCP server Claude CodeCodexCursor +2

MCP server "literatur-mcp" as configured in saidsurucu/literatur-mcp. Runs locally from the literatur-mcp Python package.

not rated 43 +1 5mo ago A tokens not measured original MIT

qiskit-code-assistant-mcp-server

34

Qiskit/mcp-servers

MCP server Claude CodeCodexCursor +2

One of 6 in server.json

MCP server for the Qiskit Code Assistant. Runs locally from the qiskit-code-assistant-mcp-server Python package. Needs 3 environment variables to run.

not rated 41 16d ago A tokens not measured original Apache-2.0

galaxy-mcp

35

galaxyproject/galaxy-mcp

MCP server Claude CodeCodexCursor +2

Model Context Protocol server for Galaxy bioinformatics platform. Runs locally from the galaxy-mcp Python package. Needs 2 environment variables to run.

not rated 39 yesterday A tokens not measured original MIT

aspenplus-mcp

36

brack101/AspenPlus-MCP-Server

MCP server Claude CodeCodexCursor +2

MCP server "aspenplus-mcp" as configured in brack101/AspenPlus-MCP-Server. Runs locally from the aspenplus-mcp Python package.

not rated 37 1y ago A tokens not measured

arcgis

37

Knight60/ArcGIS-Pro-MCP

MCP server Claude CodeCodexCursor +2

MCP server "arcgis", hosted remotely at 127.0.0.1, as configured in Knight60/ArcGIS-Pro-MCP.

not rated 37 +9 changed 1mo ago A tokens not measured AGPL-3.0

chemlint

38

molML/ChemLint

MCP server Claude CodeCodexCursor +2

MCP server "chemlint" as configured in molML/ChemLint. Runs locally from the chemlint Python package.

not rated 36 +2 3mo ago A tokens not measured original MIT

mma-mcp

39

siqiliu-tsinghua/mma-mcp

MCP server Claude CodeCodexCursor +2

MCP server "mma-mcp" as configured in siqiliu-tsinghua/mma-mcp. Runs locally from the mma-mcp Python package.

not rated 32 2mo ago A tokens not measured original MIT archived

hyades

40

apology-is-policy/hyades

MCP server Claude CodeCodexCursor +2

Render LaTeX math as pure Unicode text art for terminals, code comments, and emails. Remote server at hyades-mcp.apg.workers.dev.

not rated 30 7mo ago A tokens not measured original MPL-2.0

clio-adios

41

iowarp/clio-kit

MCP server Claude CodeCodexCursor +2

One of 22 in claude_desktop_config.json

MCP server "clio-adios" as configured in iowarp/clio-kit. Launched with clio-kit mcp-server adios.

not rated 30 16d ago A tokens not measured original BSD-3-Clause

agrobr

42

bruno-portfolio/agrobr-mcp

MCP server Claude CodeCodexCursor +2

MCP server exposing Brazilian agricultural data via agrobr. Runs locally from the agrobr-mcp Python package.

not rated 29 14d ago A tokens not measured original MIT

MS-MCP

43

DrYe1109/MS-MCP

MCP server Claude CodeCodexCursor +2

MCP server "MS-MCP" as configured in DrYe1109/MS-MCP. Launched with cmd.exe /d /c Run-MS-MCP.bat.

not rated 28 +1 3mo ago A tokens not measured original MIT

netlogo

44

Razee4315/NetLogo-MCP

MCP server Claude CodeCodexCursor +2

MCP server "netlogo" as configured in Razee4315/NetLogo-MCP. Launched with netlogo-mcp. Needs 2 environment variables to run.

not rated 27 2mo ago A tokens not measured original MIT

rowan-mcp

45

k-yenko/rowan-mcp

MCP server Claude CodeCodexCursor +2

Model Context Protocol server for Rowan computational chemistry platform. Runs locally from the rowan-mcp Python package.

not rated 24 11mo ago A tokens not measured

chemdraw-mcp

46

jurimaxam-dotcom/chemdraw-mcp

MCP server Claude CodeCodexCursor +2

MCP server that turns molecule names or SMILES into publication-style 2D structure drawings (PNG/SVG via RDKit) — reaction schemes, mechanisms, spectra. Unofficial, not affiliated with Revvity. Runs locally from the chemdraw-mcp Python package.

not rated 24 +3 today A tokens not measured original Apache-2.0

arxiv-paper-mcp

47

yzfly/Arxiv-Paper-MCP

MCP server Claude CodeCodexCursor +2

A local search and reading service for papers on arXiv, a public website where researchers share scientific papers. It can find papers and parse their contents.

not rated 23 +1 1y ago A tokens not measured original MIT

shannon-prover

48

SkyShannonProver/shannon-prover

MCP server Claude CodeCodexCursor +2

MCP server "shannon-prover" as configured in SkyShannonProver/shannon-prover. Runs locally from the shannon-prover Python package.

not rated 23 23d ago A tokens not measured

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