asb-skill-collections marketplace

asb-skill-collections marketplace is a plugin for Claude Code from HolobiomicsLab/asb-skill-collections. Its token cost is not measured, scanned A, original, Apache-2.0.

A collection of curated scientific-agent skills and tools from the AgenticScienceBuilder pipeline, covering areas such as metabolomics and related biological data analysis. Metabolomics studies the small molecules produced or changed by cells and organisms.

In plain words
What is it for?
Use it for computational metabolomics, including mass-spectrometry analysis, molecular identification, preprocessing, normalization, statistics, and multi-omics work.
Why use it?
It groups evidence-based methods and tools for scientific work so an agent can draw on specialized analysis knowledge.

Plugin for Claude Code

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Claude Code
/plugin marketplace add HolobiomicsLab/asb-skill-collections
agentmods
npx agentmods add plugins/holobiomicslab/asb-skill-collections/marketplace
Clone the repo
git clone --depth 1 https://github.com/HolobiomicsLab/asb-skill-collections

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for asb-skill-collections marketplace

README.md
[![agentmods](https://agentmods.dev/badge/plugins/holobiomicslab/asb-skill-collections/marketplace.svg)](https://agentmods.dev/plugins/holobiomicslab/asb-skill-collections/marketplace)
Your own site
<a href="https://agentmods.dev/plugins/holobiomicslab/asb-skill-collections/marketplace"><img src="https://agentmods.dev/badge/plugins/holobiomicslab/asb-skill-collections/marketplace.svg" alt="Measured on agentmods" height="20"></a>
Per session not measured What this adds to a session before it is invoked.
When invoked not measured Not applicable: nothing here is loaded into a session.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Security

Grade A, and why

asb-skill-collections marketplace scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 5d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude-plugin/marketplace.json · 184 lines

How it starts

The opening of the file, as written. The whole thing — 184 lines — stays where its author put it; the contents beside it link to each section on GitHub.

{
  "schema_version": "1.0",
  "name": "asb-skill-collections",
  "description": "Curated, evidence-grounded scientific-agent skill and tool collections from the AgenticScienceBuilder pipeline.",
  "owner": {
    "name": "Holobiomics Lab",
    "url": "https://github.com/HolobiomicsLab",
    "orcid_org": "https://orcid.org/0000-0001-6711-6719"
  },
  "publisher": {
    "name": "Holobiomics Lab",
    "url": "https://github.com/HolobiomicsLab",
    "orcid_org": "https://orcid.org/0000-0001-6711-6719"
  },
  "plugins": [
    {
      "name": "metabolomics",
      "source": "./collections/metabolomics/v2",
      "description": "ASB Metabolomics. Computational metabolomics (predominantly LC-MS/MS; also LC-MS, GC-MS, NMR, mass-spectrometry imaging, ion mobility, lipidomics, multi-omics): spectral library matching, molecular networking, formula/structure annotation (SIRIUS), preprocessing, normalization, and statistics — 5,859 evidence-grounded skills over 909 tools, each derived from a peer-reviewed method paper. Router-shaped: one router skill is advertised, the corpus ships as data and is retrieved on demand, so installing costs negligible context. Includes a Perspicacité KB auto-grounding binder.",
      "version": "0.1.0",
      "author": {
        "name": "Holobiomics Lab",
        "url": "https://github.com/HolobiomicsLab"
      },
      "homepage": "https://github.com/HolobiomicsLab/asb-skill-collections",
      "repository": "https://github.com/HolobiomicsLab/asb-skill-collections",
      "license": "CC-BY-4.0",
      "keywords": [
        "metabolomics",
        "mass-spectrometry",
        "LC-MS",
        "annotation",
        "GNPS",
        "SIRIUS",
        "molecular-networking"
      ]
    },
    {
      "name": "metabolomics-ce-ms",
      "source": "./packs/metabolomics/ce-ms",
      "description": "ASB Metabolomics — CE-MS. CE-MS subset of the ASB metabolomics collection: 114 evidence-grounded skills (lighter than the full collection; skills may also appea

Read the full file on GitHub · 184 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 5d ago First seen · 184 lines scan A 37c573a144bb

Subscribe to this mod's changes

asb-skill-collections marketplace is a plugin published in the GitHub repository HolobiomicsLab/asb-skill-collections (15 stars, last pushed 14d ago), licensed Apache-2.0. Its token cost is not measured: this kind of file is read by the harness, not the model. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.