Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add BioTender-max/awesome-bio-agent-skills --skill foldseekgit clone --depth 1 https://github.com/BioTender-max/awesome-bio-agent-skillsWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/biotender-max/awesome-bio-agent-skills/foldseek)<a href="https://agentmods.dev/skills/biotender-max/awesome-bio-agent-skills/foldseek"><img src="https://agentmods.dev/badge/skills/biotender-max/awesome-bio-agent-skills/foldseek/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/biotender-max/awesome-bio-agent-skills/foldseek"><img src="https://agentmods.dev/badge/skills/biotender-max/awesome-bio-agent-skills/foldseek.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00090 | $0.01350 |
| Opus 5 | $0.00045 | $0.00675 |
| Sonnet 5 | $0.00018 | $0.00270 |
| Haiku 4.5 | $0.00009 | $0.00135 |
Grade A, and why
foldseek scanned grade A with 2 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Makes network callslowCapability
Not a fault in itself. Listed so you know the mod talks to something, and to what.
curl -X POST "https://search.foldseek.com/api/ticket" \ Runs shell commandslowCapability
Expected in a hook, worth knowing in a rule or an instructions file.
subprocess.run([ The source is not reproduced here
A licence we could not identify
The repository carries a LICENSE file, but it is custom or dual enough that GitHub cannot name it and neither can this catalogue. Unknown terms are not permission, so the body is not copied here. Read the licence at the source and decide for yourself.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 11d ago First seen · 180 lines · 90 tokens per session scan A 27f8e43e4ec8
foldseek is a skill published in the GitHub repository BioTender-max/awesome-bio-agent-skills (176 stars, last pushed 2mo ago), with no licence file. It adds 90 tokens to every session and 1,350 once invoked, about $0.0005 per session on Opus 5. A static security scan graded it A with 2 findings (makes network calls, runs shell commands). No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
Other skills, from other repositories
foldseek
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote homologs not detected by sequence, (5) Clustering structures by similarity. For sequence similarity, use uniprot…
foldseek
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote homologs not detected by sequence, (5) Clustering structures by similarity. For sequence similarity, use uniprot…
foldseek
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote homologs not detected by sequence, (5) Clustering structures by similarity. For sequence similarity, use uniprot…
pdb
Fetch and analyze protein structures from RCSB PDB. Use this skill when: (1) Need to download a structure by PDB ID, (2) Search for similar structures, (3) Prepare target for binder design, (4) Extract specific chains or domains, (5) Get structure metadata. For sequence lookup, use uniprot. For binder design workflow…
paper-writer
Drafts publishable paper prose from the author's own materials, from a single paragraph to a full manuscript, across STEM and non-STEM fields. Every factual claim traces to user input, verified retrieval, or field common knowledge; citations pass an independent verification ladder; delivery is clean prose with zero…
pre-submission-reviewer
Runs a pre-submission review of a technical paper across five dimensions: macro logic, writing details, English grammar, LaTeX formatting, and figure quality. Uses a reviewer-style severity taxonomy (CRITICAL / MAJOR / MINOR) and flags banned AI-tone vocabulary and em-dash misuse. Use when the user asks to 'review…