netcdf-analysis

netcdf-analysis is a skill for Claude Code, Codex from cxcscmu/SkillLearnBench. It costs 24 tokens per session (312 once invoked), scanned A, original, MIT.

A Python workflow for reading NetCDF files, a format commonly used for scientific measurements and model results, produced by GLM. It extracts lake temperatures by depth and compares them with observations using RMSE, a measure of average error.

In plain words
What is it for?
Use it to read model output, convert layer height into depth, match simulated and observed values by time and depth, and calculate error scores.
Why use it?
It handles GLM's changing layer depths and helps identify how closely a simulation matches measured temperatures.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to read model output, convert layer height into depth, match…

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Install with agentmods
npx agentmods add skills/cxcscmu/skilllearnbench/netcdf-analysis
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add cxcscmu/SkillLearnBench --skill netcdf-analysis
Clone the repo
git clone --depth 1 https://github.com/cxcscmu/SkillLearnBench

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for netcdf-analysis

README.md
[![agentmods](https://agentmods.dev/badge/skills/cxcscmu/skilllearnbench/netcdf-analysis.svg)](https://agentmods.dev/skills/cxcscmu/skilllearnbench/netcdf-analysis)
Your own site
<a href="https://agentmods.dev/skills/cxcscmu/skilllearnbench/netcdf-analysis"><img src="https://agentmods.dev/badge/skills/cxcscmu/skilllearnbench/netcdf-analysis.svg" alt="Measured on agentmods" height="20"></a>
Per session 24 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 312 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00024 $0.00312
Opus 5 $0.00012 $0.00156
Sonnet 5 $0.00005 $0.00062
Haiku 4.5 $0.00002 $0.00031

Measured 3d ago against content hash 596b94c00cd4, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-06, from the pricing page.

Security

Grade A, and why

netcdf-analysis scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 3d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/b1-one-shot-claude-opus-4-6/temperature-simulation/netcdf-analysis/SKILL.md · 42 lines

What it actually says

NetCDF Analysis for GLM Output

Reading GLM Output

import netCDF4 as nc
import numpy as np
import pandas as pd

ds = nc.Dataset('output/output.nc')
temp = ds.variables['temp'][:]  # masked array [time, layers]
z = ds.variables['z'][:]        # height above bottom [time, layers]
time_var = ds.variables['time']
times = nc.num2date(time_var[:], time_var.units)

Extracting Temperature at Specific Depths

GLM uses variable layer heights. For each timestep:

lake_depth = 25  # from morphometry (crest_elev - min(H))
for t in range(len(times)):
    valid = ~temp[t].mask if hasattr(temp[t], 'mask') else np.ones(temp.shape[1], bool)
    depths_from_surface = lake_depth - z[t, valid]
    temps = temp[t, valid]
    # Interpolate to desired depth

RMSE Calculation

# Merge on exact datetime and rounded depth
# rmse = sqrt(mean((obs - sim) ** 2))

Key Notes

  • GLM z is height from lake bottom; depth = lake_depth - z
  • Round depths to nearest integer for matching
  • Use exact datetime matching (no nearest-time)
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 3d ago First seen · 42 lines · 24 tokens per session scan A 596b94c00cd4

Subscribe to this mod's changes

netcdf-analysis is a skill published in the GitHub repository cxcscmu/SkillLearnBench (83 stars, last pushed 1mo ago), licensed MIT. It adds 24 tokens to every session and 312 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

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