GGbond-bo/MemOmics-Agent

Autonomous research Agent for bioinformatics: 300+ bioinformatics skills, persistent R/Python kernels, autonomous accumulation of user experience, scripts as skills, audit and debate dual gating, self-healing supervision for long tasks, and three-layer long-term memory; autonomously builds knowledge bases, searches and extracts literature, designs research ideas, polishes papers, performs bioinformatics analysis and visualization, and more. Ready to use on Windows/Linux with any OpenAI-compatibl

This repository also configures its own agents. See what MemOmics-Agent tells them →

19Stars on the repository
261Mods indexed here, across every type
2d agoLast push, which is what freshness is scored on
MITLicence, which decides whether bodies are shown

spike

122

GGbond-bo/MemOmics-Agent

Skill Claude CodeCodex

Throwaway experiments to validate an idea before build.

not rated 19 2d ago A 13 tokens copy · 95% MIT

yuanbao

125

GGbond-bo/MemOmics-Agent

Skill Claude CodeCodex

Yuanbao (元宝) groups: @mention users, query info/members.

not rated 19 2d ago D 21 tokens copy · 98% MIT

macos-computer-use

126

GGbond-bo/MemOmics-Agent

Skill Claude CodeCodex

Drive the macOS desktop in the background — screenshots, mouse, keyboard, scroll, drag — without stealing the user's cursor, keyboard focus, or Space. Works with any tool-capable model. Load this skill whenever the computeruse tool is available.

not rated 19 2d ago A ✓ AI review 60 tokens original MIT

academic-figure-skill

127

GGbond-bo/MemOmics-Agent

Skill Codex needs its repo

Academic-grade scientific figure creation for Nature/Cell/Science journals. Use when the user asks to create, polish, review, or export scientific figures for manuscript submission. DO NOT trigger for: interactive dashboards (Plotly/Bokeh/Altair), exploratory data analysis without publication intent, math function…

not rated 19 2d ago A 0 tokens copy · 100% MIT

GGbond-bo/MemOmics-Agent

Skill Claude Code

Multi-perspective academic paper review with dynamic reviewer personas. Simulates 5 independent reviewers (Journal-Fit Reviewer + 3 peer reviewers + Devil's Advocate) with field-specific expertise. Supports full review, re-review (verification), quick assessment, methodology focus, Socratic guided, and calibration…

not rated 19 2d ago A SkillSpector: warn 0 tokens original MIT

GGbond-bo/MemOmics-Agent

Skill Claude Code

A multi-reviewer workflow for evaluating academic papers from several independent viewpoints. It combines journal fit, research methods, field knowledge, broader relevance, and deliberate challenges to the paper's arguments.

not rated 19 2d ago A 17 tokens original MIT

academic-research

130

GGbond-bo/MemOmics-Agent

Skill Claude Code

A research-planning tool for designing experiments, reviewing scientific literature, and turning a biological question into a testable study plan. It covers hypotheses, expected observations, methods, evidence, and analysis choices.

not rated 19 2d ago A SkillSpector: pass 21 tokens original MIT

adaptyv-api

131

GGbond-bo/MemOmics-Agent

Skill Claude Code

A set of rules and tools for running multi-step computational biology analyses in a controlled way. It requires each step to be researched, checked, executed, reviewed, and recorded before moving on.

not rated 19 2d ago A SkillSpector: warn 5 tokens original MIT

GGbond-bo/MemOmics-Agent

Skill Claude Code

Initiate an advanced web search by launching a specialized agent to collect relevant information and citations through multiple rounds of web searches for a given query.

not rated 19 2d ago A 35 tokens original MIT

GGbond-bo/MemOmics-Agent

Skill Claude CodeCodex

A set of safeguards for coding agents working on long repair or execution tasks. It checks whether the agent actually used tools, whether expected files exist, and whether background work is still running.

not rated 19 changed yesterday C 126 tokens original MIT

align_sequences

134

GGbond-bo/MemOmics-Agent

Skill Claude Code

Align short sequences (primers) to a longer sequence, allowing for one mismatch. Checks both forward and reverse complement strands.

not rated 19 2d ago A 28 tokens original MIT

alphafold2

135

GGbond-bo/MemOmics-Agent

Skill Claude Code

Predict protein structure for monomers and multimers with AlphaFold2 via the ColabFold runner (Mirdita et al. 2022, github.com/sokrypton/ColabFold; AlphaFold2 Jumper et al. 2021). Reach for this skill.

not rated 19 2d ago A SkillSpector: warn 60 tokens original MIT

GGbond-bo/MemOmics-Agent

Skill Claude Code

Analyze aortic diameter and geometry from cardiovascular imaging data to measure aortic root diameter, ascending aorta diameter, and calculate geometric parameters such as tortuosity and dilation indi.

not rated 19 2d ago A 43 tokens original MIT

GGbond-bo/MemOmics-Agent

Skill Claude Code

Analyze bone microarchitecture parameters from 3D micro-CT images to calculate bone mineral density, bone volume, trabecular number, thickness, and separation.

not rated 19 2d ago A 42 tokens original MIT

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