paper-search

paper-search is a skill for Claude Code, Codex from openags/paper-search-mcp. It costs 78 tokens per session (760 once invoked), scanned A, original, MIT.

A set of tools for finding, downloading, and reading academic papers from sources such as arXiv, PubMed, and bioRxiv. BioRxiv is a public website for sharing biology research papers before formal journal review.

In plain words
What is it for?
Use it to search research literature, download papers or PDFs, and read or extract text from academic papers.
Why use it?
It avoids searching each research database separately and can look for available full-text copies. It also supports finding paper details and extracting text for closer reading.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to search research literature, download papers or PDFs, and read or extract text from academic papers.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/openags/paper-search-mcp/paper-search
About the project

Paper Search MCP is a Python tool and Model Context Protocol server for finding, downloading, and extracting text from academic papers across multiple sources. Researchers and AI-driven workflows use it through MCP clients or its command-line interface, with open sources prioritized and optional API keys supported. The catalogue skill provides a way to use the project from a coding-agent workflow.

openags/paper-search-mcp · 2,839 stars · on GitHub

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add openags/paper-search-mcp --skill paper-search
Clone the repo
git clone --depth 1 https://github.com/openags/paper-search-mcp

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for paper-search

README.md
[![agentmods](https://agentmods.dev/badge/skills/openags/paper-search-mcp/paper-search/github.svg)](https://agentmods.dev/skills/openags/paper-search-mcp/paper-search)
Your own site
<a href="https://agentmods.dev/skills/openags/paper-search-mcp/paper-search"><img src="https://agentmods.dev/badge/skills/openags/paper-search-mcp/paper-search/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for paper-search

Your own site · 80×15
<a href="https://agentmods.dev/skills/openags/paper-search-mcp/paper-search"><img src="https://agentmods.dev/badge/skills/openags/paper-search-mcp/paper-search.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 78 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 760 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00078 $0.00760
Opus 5.5 $0.00031 $0.00304
Sonnet 5.5 $0.00016 $0.00152
Haiku 4.5 $0.00008 $0.00076

Measured 13d ago against content hash 43187b1de970, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

paper-search scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 13d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

Copies of this mod

1 near-identical copy found in the catalogue:

dsh/skills/paper-search/SKILL.md · 45 lines

How it starts

The opening of the file, as written. The whole thing — 45 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Academic paper discovery and retrieval in this harness runs through the mcp__paper-search__* tools (the paper-search-mcp MCP server). Do not run the paper-search CLI or hand-write API requests — use these tools.

Core tools

  • mcp__paper-search__search_papers — multi-source concurrent search with deduplication and DOI backfill. Prefer it for broad queries; one call covers many sources at once.
  • mcp__paper-search__download_with_fallback — OA-first PDF download with a source-native → repository → Unpaywall fallback chain.
  • mcp__paper-search__search_unpaywall — DOI-centric open-access metadata lookup.

Source-specific tools

Per source the pattern is search_<source> / download_<source> / read_<source>_paper, with availability varying by source. Sources: arxiv, pubmed, biorxiv, medrxiv, iacr, semantic, crossref, openalex, pmc, core, europepmc, dblp, openaire, citeseerx, doaj, base, zenodo, hal, ssrn, openreview, google_scholar. ACM search is available without an API key. IEEE tools require PAPER_SEARCH_MCP_IEEE_API_KEY. Discover the current tool list rather than assuming every source supports full text.

Web of Science (search_wos) and Scopus (search_scopus, read_scopus_paper) require runtime keys and explicit source selection; default/all searches never include them. Scopus full-text retrieval requires explicit full_text=true; respect its full_text, abstract_only, or unavailable status. Do not describe an abstract or metadata record as retrieved full text.

get_citing_papers and get_referenced_papers provide bounded one-hop OpenAlex lookups from a DOI or OpenAlex ID. Search caching is disabled by default; enabling it persists queries and public results and is an operator choice. Use get_search_cache_status to inspect it and clear_search_cache only when the user asks to remove cached results. Clearing does not remove downloaded PDFs.

For speed, prefer a targeted set (search_arxiv, search_semantic, search_crossref) over multi-source search when the field is clear.

Read the full file on GitHub · 45 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 13d ago First seen · 45 lines · 78 tokens per session scan A 43187b1de970

Subscribe to this mod's changes

paper-search is a skill published in the GitHub repository openags/paper-search-mcp (2,839 stars, last pushed 14d ago), licensed MIT. It adds 78 tokens to every session and 760 once invoked, about $0.0003 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-10-03.

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