Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add Pavel-Kravchenko/Bioinformatics --skill bio-applied-cite-seq-integrationgit clone --depth 1 https://github.com/Pavel-Kravchenko/BioinformaticsWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/pavel-kravchenko/bioinformatics/bio-applied-cite-seq-integration)<a href="https://agentmods.dev/skills/pavel-kravchenko/bioinformatics/bio-applied-cite-seq-integration"><img src="https://agentmods.dev/badge/skills/pavel-kravchenko/bioinformatics/bio-applied-cite-seq-integration/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/pavel-kravchenko/bioinformatics/bio-applied-cite-seq-integration"><img src="https://agentmods.dev/badge/skills/pavel-kravchenko/bioinformatics/bio-applied-cite-seq-integration.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00074 | $0.02430 |
| Opus 5 | $0.00037 | $0.01215 |
| Sonnet 5 | $0.00015 | $0.00486 |
| Haiku 4.5 | $0.00007 | $0.00243 |
Grade A, and why
bio-applied-cite-seq-integration scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
The source is not reproduced here
No licence file
A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 11d ago First seen · 181 lines · 74 tokens per session scan A a019275425f4
bio-applied-cite-seq-integration is a skill published in the GitHub repository Pavel-Kravchenko/Bioinformatics (5 stars, last pushed 2mo ago), with no licence file. It adds 74 tokens to every session and 2,430 once invoked, about $0.0004 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.
Other skills, from other repositories
seurat-skill
Comprehensive Seurat v5 (R) guide for single-cell RNA-seq and multimodal analysis. Covers installation, standard workflows (Normalize/SCTransform), clustering, integration (CCA/RPCA/Harmony), differential expression (FindMarkers/FindAllMarkers), visualization (DimPlot/FeaturePlot/VlnPlot/DoHeatmap), spatial…
r-bio
R bioinformatics packages. Use for genomic data analysis, RNA-seq, phylogenetics, and Bioconductor workflows.
nlme
R nlme package for mixed-effects models. Use for linear and nonlinear mixed-effects models with correlation structures.
survminer
R survminer package for survival visualization. Use for publication-ready Kaplan-Meier plots and forest plots.
r-network
R network analysis packages. Use for graph analysis, social network analysis, network visualization, and community detection.
statnet
R statnet suite for network analysis. Use for statistical modeling of network data including ERGM.