scdenney/open-science-skills

Agentic skills for Claude Code and Codex, built from published social-science methods sources. Covers experimental design, computational text analysis, manuscript QA, and transparent reporting.

54Stars on the repository
90Mods indexed here, across every type
3d agoLast push, which is what freshness is scored on
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advisor

01

scdenney/open-science-skills

Skill Claude CodeCodex

Consult an independent, read-only GPT-5.6 advisor before committing to a substantive interpretation, approach, or final result. Not for routine work, implementation, or file edits. Always gpt-5.6-sol at xhigh effort, the flagship tier at its strongest routine setting.

not rated 54 +4 3d ago A 60 tokens

citation-check

02

scdenney/open-science-skills

Skill Claude CodeCodex

Audits the citation layer of a manuscript — in-text and reference-list parity, fabricated or nonexistent sources, DOIs that resolve to a different work, style and completeness against APA 7 or a named journal style, and whether each cited work actually supports the claim attached to it. Verifies against Crossref…

not rated 54 +4 changed 2d ago A 148 tokens

conjoint-cleaning

03

scdenney/open-science-skills

Skill Claude CodeCodex

Turns a raw Qualtrics conjoint export into an analysis-ready long-format dataset — export settings and metadata rows, identifying which Qualtrics implementation produced the file, reshaping wide to long by hand or with cjoint read.qualtrics and cjdata reshapeconjoint, mapping the choice variable onto profiles, ratings…

not rated 54 +4 changed 2d ago A 147 tokens

conjoint-design

04

scdenney/open-science-skills

Skill Claude CodeCodex

Designs conjoint and factorial-vignette experiments end to end — attribute architecture and randomization restrictions, effective-N power from the closed-form AMCE standard error, treatment realism, estimand choice among AMCE, marginal means, and AMIE, design variants such as forced choice versus rating, PAP tiers for…

not rated 54 +4 changed 2d ago A 142 tokens

scdenney/open-science-skills

Skill Claude CodeCodex

Reviews an existing conjoint study for threats to inference and returns prioritized findings across five areas — design integrity (attributes, profile restrictions, task count and satisficing, randomization, power), estimation (estimand clarity, reference levels, subgroups, clustered standard errors, multiple…

not rated 54 +4 changed 2d ago A 139 tokens

scdenney/open-science-skills

Skill Claude CodeCodex

Designs multi-country survey experiments — case selection with a stated comparative logic, instrument localization and TRAPD translation, origin-country and composition choices for stimuli, per-country power and error management, and a pooled-versus-per-country analytical strategy with measurement-equivalence checks.…

not rated 54 +4 changed 2d ago A 142 tokens

diverge

07

scdenney/open-science-skills

Skill Claude CodeCodex

Generate 3-5 conceptually distinct approaches labeled by creativity dimension (Novel, Surprising, Diverse, Conventional) and hold for selection instead of implementing the first idea; the --codex mode delegates the brainstorm to a fresh Codex subagent for a clean, unanchored context and hands it the selected approach…

not rated 54 +4 changed 2d ago A 120 tokens

doc-to-markdown

08

scdenney/open-science-skills

Skill Claude CodeCodex

Read or convert any document a research workflow hands you — PDF, Word, PowerPoint, Excel, OpenDocument, RTF, EPUB, or CSV. Use whenever a document has to be read, opened, quoted, summarized, searched, extracted, or added to a source library. Decides whether to read the file directly or convert it, picks the converter…

not rated 54 +4 changed 2d ago A 101 tokens

fact-check

09

scdenney/open-science-skills

Skill Claude CodeCodex

Fact-check manuscript claims against cited sources in a per-source Markdown knowledge base. Use to audit claim support, overclaiming, direction, scope, and misattribution after source intake is complete.

not rated 54 +4 3d ago A 42 tokens

figure-table-audit

10

scdenney/open-science-skills

Skill Claude CodeCodex

End-stage QA on a finished figure and table set — an inventory with in-text callouts and producing scripts, cross-reference and numbering checks, text-to-evidence consistency between claims and plotted or tabulated values, captions and statistical notes that stand alone, accessibility and production quality, and SI…

not rated 54 +4 changed 2d ago A 133 tokens

figures

11

scdenney/open-science-skills

Skill Claude CodeCodex

Design and format publication-quality figures. Use for chart choice, color, scales, legends, captions, accessibility, and reproducible figure workflows.

not rated 54 +4 changed 2d ago A 31 tokens

hypothesis-building

12

scdenney/open-science-skills

Skill Claude CodeCodex

Turns a theory into falsifiable, pre-registerable hypotheses — DAGs and backdoor closure, how the design resolves the FPCI, SATE versus PATE, counterfactual and directional framing, a named theoretical and empirical estimand, a justified SESOI, the choice among NHST, interval, equivalence (TOST), and minimum-effect…

not rated 54 +4 changed 2d ago A 155 tokens

journal-review

13

scdenney/open-science-skills

Skill Claude CodeCodex

Drafts a referee report on someone else's manuscript for a journal editor — a recommendation, a summary of the claim and design, three to six major concerns that drive the decision, additional concerns, and a coherent revision plan, produced by five parallel adversarial finders (Breaker, Butcher, Shredder, Void…

not rated 54 +4 changed 2d ago A 142 tokens

list-experiment

14

scdenney/open-science-skills

Skill Claude CodeCodex

Designs and diagnoses list experiments (the item count technique) — whether indirect measurement is warranted at all, control-list construction against ceiling and floor effects, design variants such as double list and direct-question pairing, difference-in-means and maximum-likelihood estimators via ictreg, the…

not rated 54 +4 changed 2d ago A 148 tokens

literature-review

15

scdenney/open-science-skills

Skill Claude CodeCodex

Build or audit a literature review. Use for evidence maps, gap analysis, contribution checks, source verification, and synthesis planning.

not rated 54 +4 3d ago A 29 tokens

scdenney/open-science-skills

Skill Claude CodeCodex

Reads a model's own uncertainty off its token log-probabilities — collecting logprobs and aggregating multi-token labels, confidence tiers and margins for triage, calibration assessment with ECE, Brier scores, and reliability diagrams, using confidence downstream without laundering it into evidence, and what to…

not rated 54 +4 changed 2d ago A 151 tokens

methods-reporting

17

scdenney/open-science-skills

Skill Claude CodeCodex

Audits a methods section against a 45-item checklist synthesized from the APSA Experimental Section rubric, JARS-Quant, CONSORT, and DA-RT — pre-registration and design documentation, subjects and recruitment, randomization and treatment detail, CONSORT-style sample flow with attrition, statistical analysis with…

not rated 54 +4 changed 2d ago A 147 tokens

model-committee

18

scdenney/open-science-skills

Skill Claude CodeCodex

Run one consequential, contestable decision through a deliberative committee of GPT-5.6 and Claude Opus 5, chaired by opus (default), fable, or sol. Not for factual lookups, brainstorming, routine implementation, independent-coder reliability, or final professional judgment. Use when several options are defensible and…

not rated 54 +4 changed 2d ago A 92 tokens

scdenney/open-science-skills

Skill Claude CodeCodex

Runs several language models as independent coders on the same labeling or discovery task and reads their disagreement as data — panel assembly for model diversity, keeping votes independent, consensus rules, agreement statistics (Cohen's and Fleiss kappa, Krippendorff's alpha), the correlated-errors caveat that stops…

not rated 54 +4 changed 2d ago A 149 tokens

narrative-building

20

scdenney/open-science-skills

Skill Claude CodeCodex

Draft or audit scientific introductions. Use for argument logic, framing, contribution structure, and coherence across multiple studies or experiments.

not rated 54 +4 3d ago A 29 tokens

paper-review-lite

21

scdenney/open-science-skills

Skill Claude CodeCodex

Run a pre-submission manuscript audit covering argument, numerics, references, writing, figures, methods, preregistration, and replication readiness. Add --codex for a cross-model pass in which Codex and Claude review independently and verify each other's findings.

not rated 54 +4 changed 2d ago A 56 tokens

paper-tex

22

scdenney/open-science-skills

Skill Claude CodeCodex

Typeset a working paper or journal submission in house-style LaTeX from Markdown, Word, TeX, ODT, RTF, or HTML. Use to convert drafts, build PDFs, or prepare journal-specific spacing, limits, anonymization, disclosures, and citations.

not rated 54 +4 3d ago A 59 tokens

scdenney/open-science-skills

Skill Claude CodeCodex

Writes a pre-analysis plan before data collection — registry selection (OSF, AsPredicted, AEA, EGAP), PAP document structure, an analytical strategy specified down to the model and the decision rule, analysis code pre-registered against simulated data, contingency planning for attrition, failed manipulations, and…

not rated 54 +4 changed 2d ago A 146 tokens

qualtrics-ops

24

scdenney/open-science-skills

Skill Claude CodeCodex

Operate or audit a live Qualtrics survey via the v3 APIs without breaking fielding — publish gating, quotas, flow routing, embedded data, panel-vendor redirects, read-back verification, and a read-only pre-fielding audit. Use when publishing or patching a fielding instrument, when a quota counts but never blocks, when…

not rated 54 +4 changed 2d ago A 117 tokens

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