conducting-scientific-research

conducting-scientific-research is a skill for Claude Code, Codex from Shoko-official/Claude-Science-System-Prompts. It costs 99 tokens per session (606 once invoked), scanned A, original, Apache-2.0.

A workflow for carrying out multi-step scientific research using papers, databases, files, code, and approved computing resources. It covers work such as evidence reviews, data analysis, simulations, study design, and scientific writing.

In plain words
What is it for?
Use it to combine literature and database searches with Python, R, or shell analysis; create figures or manuscripts; reproduce published work; or audit whether a study can be repeated.
Why use it?
It helps keep research reproducible: others can follow what was done, check the evidence, and review the results. It also provides a structured path from the question to validated, saved results.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to combine literature and database searches with Python, R, or shell analysis; create figures or manuscripts; reproduce published work; or audit whether a study can be repeated.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/shoko-official/claude-science-system-prompts/conducting-scientific-research
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add Shoko-official/Claude-Science-System-Prompts --skill conducting-scientific-research
Clone the repo
git clone --depth 1 https://github.com/Shoko-official/Claude-Science-System-Prompts

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for conducting-scientific-research

README.md
[![agentmods](https://agentmods.dev/badge/skills/shoko-official/claude-science-system-prompts/conducting-scientific-research/github.svg)](https://agentmods.dev/skills/shoko-official/claude-science-system-prompts/conducting-scientific-research)
Your own site
<a href="https://agentmods.dev/skills/shoko-official/claude-science-system-prompts/conducting-scientific-research"><img src="https://agentmods.dev/badge/skills/shoko-official/claude-science-system-prompts/conducting-scientific-research/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for conducting-scientific-research

Your own site · 80×15
<a href="https://agentmods.dev/skills/shoko-official/claude-science-system-prompts/conducting-scientific-research"><img src="https://agentmods.dev/badge/skills/shoko-official/claude-science-system-prompts/conducting-scientific-research.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 99 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 606 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00099 $0.00606
Opus 5 $0.00049 $0.00303
Sonnet 5 $0.00020 $0.00121
Haiku 4.5 $0.00010 $0.00061

Measured 12d ago against content hash 107c3e5af570, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-12, from the pricing page.

Security

Grade A, and why

conducting-scientific-research scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 12d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/conducting-scientific-research/SKILL.md · 45 lines

How it starts

The opening of the file, as written. The whole thing — 45 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Conducting Scientific Research

Use this skill when the task is scientific work rather than a single factual explanation. Adapt the procedure to the request; do not force every task through every reference.

Start

  1. Read the project instructions and inspect the referenced files, artifacts, prior sessions, environments, connectors, compute, and reviewer state.
  2. Define the requested result and the smallest evidence or execution path that can support it.
  3. Read the relevant references below before the first substantive action.
  4. Identify the validation gate, durable artifacts, and any new permission or external-action boundary.
  5. Execute, validate, save the record, request review when material, address findings, and report the result.

Reference routing

Read only the references that affect the active work. Keep reference loading one level deep.

Required behavior

  • Never report execution, retrieval, validation, review, or saving unless the record proves it.
  • Keep source claims, direct observations, computed values, inferences, and hypotheses distinct.
  • Preserve raw inputs and material identity: units, builds, versions, identifiers, filters, joins, exclusions, and query dates.
  • Do not rely on hidden kernel state for a durable result; save code and rerun from declared inputs when practical.
  • Validate fragile retrievals, joins, models, figures, and artifacts with an independent check.
  • Use the least permission necessary. Do not expose credentials or perform an external action without the required approval.

Read the full file on GitHub · 45 lines

Files

What ships with it

5 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 12d ago First seen · 45 lines · 99 tokens per session scan A 107c3e5af570

Subscribe to this mod's changes

conducting-scientific-research is a skill published in the GitHub repository Shoko-official/Claude-Science-System-Prompts (10 stars, last pushed 1mo ago), licensed Apache-2.0. It adds 99 tokens to every session and 606 once invoked, about $0.0005 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.