research-wiki

research-wiki is a skill for Claude Code from wanshuiyin/Auto-claude-code-research-in-sleep. It costs 73 tokens per session (5,397 once invoked), scanned A, original, MIT.

A persistent research knowledge base for storing papers, ideas, experiments, claims, and the links between them.

In plain words
What is it for?
Use it to record papers, track ideas and experiments, store claims, and query the accumulated research history.
Why use it?
It keeps research knowledge available across a project instead of making each literature search or experiment stand alone.

Skill for Claude Code

Written for Claude Code: allowed-tools in frontmatter. Also seen: positional $N argument; mentions Codex.

Good fit Use it to record papers, track ideas and experiments, store claims, and query the accumulated research history.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki
About the project

ARIS is a collection of Markdown-based skills that define a workflow for autonomous machine-learning research, including idea discovery, experiment automation, and review loops. Researchers and AI coding agents use it across tools such as Claude Code, Codex, Cursor, and OpenClaw without depending on a single framework. The catalogue entries are ARIS workflow skills and agents.

wanshuiyin/Auto-claude-code-research-in-sleep · 16,030 stars · on GitHub

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add wanshuiyin/Auto-claude-code-research-in-sleep --skill research-wiki
Clone the repo
git clone --depth 1 https://github.com/wanshuiyin/Auto-claude-code-research-in-sleep

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for research-wiki

README.md
[![agentmods](https://agentmods.dev/badge/skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki/github.svg)](https://agentmods.dev/skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki)
Your own site
<a href="https://agentmods.dev/skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki"><img src="https://agentmods.dev/badge/skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for research-wiki

Your own site · 80×15
<a href="https://agentmods.dev/skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki"><img src="https://agentmods.dev/badge/skills/wanshuiyin/auto-claude-code-research-in-sleep/research-wiki.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 73 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 5,397 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • Socket pass 17 May 2026
  • Snyk warn 17 May 2026
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00073 $0.05397
Opus 5 $0.00036 $0.02698
Sonnet 5 $0.00015 $0.01079
Haiku 4.5 $0.00007 $0.00540

Measured 9d ago against content hash 3bd314f83f2d, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-12, from the pricing page.

Security

Grade A, and why

research-wiki scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 9d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

Copies of this mod

1 near-identical copy found in the catalogue:

skills/research-wiki/SKILL.md · 462 lines

How it starts

The opening of the file, as written. The whole thing — 462 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Research Wiki: Persistent Research Knowledge Base

Subcommand: $ARGUMENTS

Overview

The research wiki is a persistent, per-project knowledge base that accumulates structured knowledge across the entire ARIS research lifecycle. Unlike one-off literature surveys that are used and forgotten, the wiki compounds — every paper read, idea tested, experiment run, and review received makes the wiki smarter.

Inspired by Karpathy's LLM Wiki pattern: compile knowledge once, keep it current, don't re-derive on every query.

Core Concepts

Four Entity Types

Entity Directory Node ID format What it represents
Paper papers/ paper:<slug> A published or preprint research paper
Idea ideas/ idea:<id> A research idea (proposed, tested, or failed)
Experiment experiments/ exp:<id> A concrete experiment run with results
Claim claims/ claim:<id> A theorem/headline with an honest PROOF status — born via /proof-checker (see Hook 4)

Typed Relationships (graph/edges.jsonl)

Edge type From → To Meaning
extends paper → paper Builds on prior work
contradicts paper → paper Disagrees with results/claims
addresses_gap paper|idea → gap Targets a known field gap
inspired_by idea → paper Idea sourced from this paper
tested_by idea|claim → exp Tested in this experiment
supports exp → claim|idea Experiment confirms claim
invalidates exp → claim|idea Experiment disproves claim
supersedes paper → paper Newer work replaces older

Edges are stored in graph/edges.jsonl only. The ## Connections section on each page is auto-generated from the graph — never hand-edit it.

Capture hygiene (anti-self-poisoning)

Before persisting an idea / claim / experiment note, screen it for operational noise that would harden into a self-cited falsehood (see shared-references/capture-antipatterns.md). Resolve the helper via the canonical chain (integration-contract §2): .aris/tools/capture_filter.pytools/capture_filter.py$ARIS_REPO/tools/capture_filter.py (warn-and-skip if unresolved). Run python3 <capture_filter> - on the note text; if it flags env-failure / transient-error / negative-tool-claim, do NOT store it as a durable node — rewrite it to the fix / missing config / workaround, or drop it. Never store "codex/gemini/the reviewer can't do X" — that gets loaded into every future session and cited against the agent long after the real cause is gone. (The wiki's "failed ideas → anti-repeat memory" is the GOOD inverse: a class-level research finding, not operational noise.)

Read the full file on GitHub · 462 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 9d ago First seen · 462 lines · 73 tokens per session scan A 3bd314f83f2d

Subscribe to this mod's changes

research-wiki is a skill published in the GitHub repository wanshuiyin/Auto-claude-code-research-in-sleep (16,030 stars, last pushed yesterday), licensed MIT. It adds 73 tokens to every session and 5,397 once invoked, about $0.0004 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

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