Skill Claude CodeCodex
Use when checking manuscript citations, bibliography hygiene, DOI or PMID completeness, placeholder references, or BibTeX consistency before submission or revision.
Skill Claude CodeCodex
Use when checking manuscript citations, bibliography hygiene, DOI or PMID completeness, placeholder references, or BibTeX consistency before submission or revision.
Skill Claude CodeCodex
Use when a manuscript's claims need to be checked against the sources cited for them, when literature search results must be verified before they enter a draft, or when an agent or collaborator has proposed references that have not yet been adversarially reviewed. This is claim-to-evidence verification, not…
Skill Claude CodeCodex
Use when drafting, auditing, or revising Data Availability statements, repository plans, accession-number placement, source-data coverage, or restricted-data wording for journal submission or resubmission.
Skill Claude CodeCodex
Use when a manuscript is being drafted across many sessions and needs auditable open-question tracking: in-source draft markers with distinct jobs, triage of open items by what would actually resolve each one, word counts that exclude draft apparatus, safe archival of superseded material, and assertion-guarded…
Skill Claude CodeCodex
Use when designing, restructuring, or auditing manuscript figures and you need to define one main claim per figure, assign panel roles, align legends with the text, or decide what belongs in main figures versus supplement.
Skill Claude CodeCodex
Use when auditing, restructuring, or revising a research manuscript whose scientific question, claim hierarchy, evidence chain, section logic, figures, terminology, or prose may be unclear or out of sync. Apply before sentence-level polishing, especially for whole drafts, major revisions, resubmissions, overclaiming…
Skill Claude CodeCodex
Use when starting a new manuscript project or cleaning up an existing paper directory and you need a standard structure, active source files, project memory, and venue defaults before deeper writing begins.
Skill Claude CodeCodex
Entry point for any manuscript request that does not name a specific skill. Load this FIRST whenever the ask is general, then run the chain it prescribes. Covers optimize my paper, improve the manuscript, polish this draft, make this better, clean it up, help with my paper, review my writing, get this ready to submit…
Skill Claude CodeCodex
Analyze, draft, revise, or audit scientific peer-review response letters and point-by-point rebuttals. Use for reviewer comments, response letters, rebuttals, revision summaries, quoted manuscript changes, replies that must align with a manuscript or Supplementary Information, and submission-ready checks of direct…
Skill Claude CodeCodex
Use when revising a scientific manuscript Results section whose figures, evidence, and main claims are mostly fixed, but subsection flow, paragraph openings, reader guidance, and argumentative progression still feel abrupt, repetitive, or figure-by-figure.
Skill Claude CodeCodex
Use when writing, restructuring, or auditing a Review, survey, or Perspective rather than a research article, especially a commissioned one written across many sessions. Covers the governing plan document, drift detection, single-definition thesis and field judgements, section-owns-figure allocation, display-item…
Skill Claude CodeCodex
Prose-quality rules for writing scientific manuscript text — abstract, introduction, results, discussion. The headline rule is a strict em-dash budget: the long dash (—) is overused and reads as a stylistic tic, so cap it and rewrite with commas, colons, parentheses, or a period. Also covers hedging, sentence rhythm…
Skill Claude CodeCodex
Use when writing or revising scientific manuscripts, abstracts, figures, or references for journal submission and you need full-paragraph prose, scientific structure, citation-style guidance, or reporting-guideline support.
Skill Claude CodeCodex
Audit, revise, or draft manuscript statistical reporting for Nature / high-impact journal submissions. Use when the user asks to check statistical analysis sections, p values, confidence intervals, sample size, biological versus technical replicates, randomization, blinding, multiple-comparison correction, model…
Skill Claude CodeCodex
Use when a manuscript is close to submission or resubmission and you need a preflight audit for claim support, figure-panel coverage, legend sync, methods references, terminology stability, and venue-facing risks.
Skill Claude CodeCodex
Diagnose and repair the clarity and logic of manuscript prose, journal-agnostic. Use when a passage is technically correct but hard to follow: buried topic sentences, missing logical bridges, ambiguous referents, abstract noun chains, overloaded sentences, incomplete comparisons with no stated dataset or metric or…
Skill Claude CodeCodex
Publication-grade figure correctness and legibility rules for final-deliverable figures — not every plot. Quick look or iterating on the analysis (EDA scatters, sanity-check histograms)? Plot plainly without this skill. Producing a figure that ships — report, paper, export, or kept artifact — load this skill first and…
Skill Claude CodeCodex
Submission-grade Nature/high-impact journal figure workflow for Python or R, plus optional OpenRouter GPT Image 2 manuscript schematic generation when the user explicitly asks for AI-generated graphical abstracts, concept schematics, mechanism diagrams, or paper schematic illustrations. Use whenever the user asks to…
Skill Claude CodeCodex
Create academic presentation slide decks and optionally demo videos from research papers. Use when the user asks to "make slides", "create a deck", "make a presentation", "demo video", "paper slides", "conference talk slides", or wants to turn a paper into a visual presentation. Covers slide generation, narration…
Skill Claude CodeCodex
Use when writing or revising ML or AI conference papers for venues such as NeurIPS, ICML, ICLR, ACL, AAAI, or COLM, especially when the workflow is conference-first rather than Nature-style journal-first.
Skill Claude CodeCodex
Verify that cited references actually exist and that their metadata matches, using the runnable scripts this skill ships for CrossRef, Semantic Scholar, arXiv, and PubMed. Use when the bibliography must be checked against live sources rather than inspected locally: detecting fabricated or hallucinated citations…
Skill Claude CodeCodex
Use when conducting literature reviews, summarizing papers, comparing methodologies, identifying research gaps, or supporting scholarly writing across disciplines.
Skill Claude CodeCodex
Use when deeply analyzing a single paper and producing structured notes on claims, methods, figures, evaluation, strengths, limitations, and related work.
Skill Claude CodeCodex
Use when analyzing experimental results, validating comparisons, generating paper-ready results text, or turning model-evaluation outputs into figures, tables, and defensible claims.