Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add Boom5426/Nature-Paper-Skills --skill manuscript-optimizergit clone --depth 1 https://github.com/Boom5426/Nature-Paper-SkillsWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/boom5426/nature-paper-skills/manuscript-optimizer)<a href="https://agentmods.dev/skills/boom5426/nature-paper-skills/manuscript-optimizer"><img src="https://agentmods.dev/badge/skills/boom5426/nature-paper-skills/manuscript-optimizer/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/boom5426/nature-paper-skills/manuscript-optimizer"><img src="https://agentmods.dev/badge/skills/boom5426/nature-paper-skills/manuscript-optimizer.svg" alt="Reviewed on agentmods" width="80" height="20"></a>- NVIDIA SkillSpector pass
What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00085 | $0.03135 |
| Opus 5.5 | $0.00034 | $0.01254 |
| Sonnet 5.5 | $0.00017 | $0.00627 |
| Haiku 4.5 | $0.00009 | $0.00314 |
Grade A, and why
manuscript-optimizer scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 16d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 320 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Manuscript Optimizer
Treat scientific writing as reasoning, not decoration. Do not make existing results sound more impressive. Organize the scientific question, evidence, interpretation, and conclusion into a chain that a broad scientific reader can follow and evaluate.
Use this priority order without exception:
scientific correctness > logic > information structure > clarity > concision > style
Prefer the simplest sentence that preserves the full scientific meaning. Never polish prose built on an unstable claim, a missing evidence link, or a false scientific premise.
Scope and handoff
Use this skill above the sentence level. Own the paper's scientific direction, claim architecture, evidence boundaries, section and paragraph functions, figure-text logic, and terminology.
- Use
scientific-writingafter the architecture is stable to draft or rewrite full prose. - Use
write-scientific-manuscriptto repair paragraph-level clarity and local reasoning. - Use
anti-defensive-writingonce the claims are stable, to remove audit, defensive and self-critical writing from the main text and SI. - Use
scientific-prose-stylelast for punctuation and rhythm. - Use
results-section-revisiononly when the claims are stable and Results needs local flow repair. - Use
review-article-architectureinstead for a Review, survey, or Perspective.
For review-only requests, diagnose and stop. For revision requests, diagnose first and then edit in the macro-to-micro order below.
Hard constraints
Preserve the scientific record. Never:
- invent an experiment, result, citation, mechanism, or conclusion;
- alter a number, metric, comparison, data split, configuration, seed, or significance status;
- turn correlation, prediction, sensitivity, or consistency into causation or mechanism;
- turn a trend into a statistically significant result;
- generalize a dataset-, task-, model-, or condition-specific result into a universal conclusion;
- delete an important counterexample, negative result, or metric disagreement to improve the story;
- silently change the meaning of a term or the direction of a comparison.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 16d ago Changed · +14 lines 74950b204a6a
- 17d ago Changed · -64 lines e41faf17d58d
- 26d ago Changed · +6 lines 6fb9df6ba782
- 1mo ago First seen · 364 lines · 85 tokens per session scan A 97015ca99358
manuscript-optimizer is a skill published in the GitHub repository Boom5426/Nature-Paper-Skills (633 stars, last pushed 13d ago), licensed MIT. It adds 85 tokens to every session and 3,135 once invoked, about $0.0003 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
Other skills, from other repositories
paper2poster-poster
Use when the user wants to turn an academic paper into a conference poster, poster outline, poster copy deck, poster layout brief, poster.yaml style draft, or Paper2Poster-ready generation package. Trigger for paper-to-poster requests involving PDF papers, arXiv links, manuscripts, PPTX posters, conference…
anti-defensive-writing-en
Stops defensive writing across the entire paper lifecycle — writing, revising, cutting, and organizing experiments. Treats the paper as a press conference, not a project summary, lab log, or self-audit: identify the single most publishable strength of the work and build the most favorable, complete, and persuasive…
anti-defensive-writing
A Chinese-language writing guide for presenting a research paper around its strongest supported contribution. It treats the paper as a focused academic presentation rather than a project diary or complete lab record.
fin-submit-check
A pre-submission checklist for an academic paper and its LaTeX files. It checks journal requirements such as anonymous authorship, length, spacing, margins, citations, figures, data availability, and other submission details.
light-paper-writing
A research-paper writing workflow that links each important claim to evidence and checks whether the wording matches the strength of that evidence.
light-research-plan
A research-planning guide for turning an approved idea into a reproducible experiment plan. It defines what to compare, what to measure, when to stop, and how to record seeds, environments, versions, and data splits.