zamushwani/biomedical-ai-skills
Command Claude Code
Spatial transcriptomics analysis: loading, spatial QC, spatially variable genes, deconvolution, domains. Use for Visium, Xenium, MERSCOPE, or CosMx data.
10 tagged cancer-research, measured the same way as everything else here.
Browse within: ai-skills 10bioinformatics 10cancer-genomics 10
zamushwani/biomedical-ai-skills
Command Claude Code
Spatial transcriptomics analysis: loading, spatial QC, spatially variable genes, deconvolution, domains. Use for Visium, Xenium, MERSCOPE, or CosMx data.
zamushwani/biomedical-ai-skills
Command Claude Code
Annotate and clinically interpret variants from a VCF. Use when the user has variant calls and wants functional annotation, ACMG classification, oncogenicity, or clinical tiers.
zamushwani/biomedical-ai-skills
Command Claude Code
Pathway enrichment on a ranked gene list (GSEA or ORA). Use when the user asks which pathways are enriched, wants GSEA/fgsea, or has DE results to interpret biologically.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: