527 tagged Scientific, measured the same way as everything else here.
Browse within: bioinformatics 28model-context-protocol 15machine-learning 13cyanheads 12genomics 11drug-discovery 9Cheminformatics 7academic-writing 7ai-tools 7LaTeX 6astronomy 6claude-plugin 6ai-research 5calculator 5
AiAgentKarl/aviation-mcp-server
Instructions file
Instructions for AiAgentKarl/aviation-mcp-server, covering aviation mcp server — projektanweisungen, projektübersicht, tech stack, konventionen and architektur.
Instructions file
Claude Code instructions for gregario/astronomy-oracle, covering astronomy oracle, stack, commands, architecture and testing.
zachswift615/audio-analysis-mcp
Instructions file
Claude Code instructions for zachswift615/audio-analysis-mcp, covering audio analysis mcp tool, when to use, tool signature, quick reference and interpreting results.
puran-water/water-chemistry-mcp
Instructions file
Instructions for puran-water/water-chemistry-mcp, covering water chemistry mcp server system prompt, server: waterchemistrymcp, scientific integrity & engineering efficiency, core tools and 1. calculatesolutionspeciation.
Instructions file CodexOpenCode
Instructions for S2mon123/FEP-Agent-Hub, a project described as: Evidence-first FreeCAD, Elmer FEM, and ParaView MCP automation stack with verified CAE workflows and Codex Skill.
HighScientist/drug-designer-skill
Instructions file CodexOpenCode
AGENTS.md instructions for HighScientist/drug-designer-skill, covering agents.md — codex adapter for drug-designer, when to load the skill, how to use the skill, what not to do and merge guidance.
Instructions file CodexOpenCode
A repository guide in AGENTS.md for cst-sim-agent, a tool that lets an AI assistant control CST Studio Suite for electromagnetic simulations. It explains the project layout and how its tools connect to the simulation software.
cyanheads/astronomy-mcp-server
Instructions file CodexOpenCode
Instructions for cyanheads/astronomy-mcp-server, covering developer protocol, server surface, core rules, patterns and tool.
wei-ai-lab/clinical-trial-design
Instructions file CodexOpenCode
Instructions for wei-ai-lab/clinical-trial-design, covering agents.md — codebase tour for ai agent contributors, what clinical-trial-design is, repo layout, the four layers and how to add a design wrapper.
Instructions file
Instructions for taehojo/alphagenome-mcp, covering claude.md, project overview, development commands, building and testing and install dependencies.
dtunai/agent-skills-for-compute
Instructions file CodexOpenCode
AGENTS.md instructions for dtunai/agent-skills-for-compute, covering agent skills for compute, structure, skill format and adding new skills.
Instructions file Gemini CLI
Instructions for jeonnoin-alt/Eureka, a project described as: Scientific TDD for AI coding agents: pre-registration before data, claims audit before submission, external novelty gate, reproducibility. Claude Code + 4 platforms.
Instructions file
Instructions for Sliky1/lagrangian-skills, covering claude.md, version, skill entrypoint, development rules and lightweight validation.
Stephen-studying/tech-route-maker
Instructions file CodexOpenCode
Instructions for Stephen-studying/tech-route-maker, covering agents.md, project overview, required behavior, common commands and safety.
Instructions file CodexOpenCode
Instructions for lancegui/causal-powers, a project described as: Economist's discipline for data analysis, causal inference, and econometrics — reduced-form and structural. A Claude Code plugin whose name is a homage to superpowers; it makes the silent failures of data work loud.
Instructions file
Instructions for Dariolex/pubmed-search-agent, covering pubmed nl search agent — claude.md, 1. obiettivo del progetto, 2. stato del progetto, 3. architettura and 4. api pubmed (ncbi e-utilities) — riferimento tecnico.
Instructions file
Project instructions for Genome MCP, a server that lets coding agents query gene information, compare related genes across species, and study evolution using public biology databases. MCP is a standard way for tools and agents to exchange information.
Instructions file
Instructions for Joe-Heffer/trainer, covering claude.md, project overview, technology stack, commands and development setup.
Instructions file CodexOpenCode
Instructions for sxzgroup/ORBIT-Q, covering agents.md, quick bootstrap, framework image strategy, run a challenge with codex or claude code and verifier-only candidate check.
Instructions file Gemini CLI
Gemini CLI instructions for Eklavya-San/CTQ-extraction, a project described as: AI agent skill for extracting Critical-To-Quality (CTQ) parameters, GD&T feature control frames, and verbatim tolerances from engineering drawings & CAD files into structured JSON.
Instructions file CodexOpenCode
Project instructions for creating a daily digest of research papers from arXiv, a website where researchers share scientific papers. They describe how to fetch and read the paper data and how it is structured in JSON.
zzz20020612/scientific-figure-standards
Instructions file CodexOpenCode
Instructions for zzz20020612/scientific-figure-standards, covering scientific figure standards, required first question, template-first rule, hard defaults and required references.
zjgao-spin/Autoresearch_MRsequence
Instructions file CodexOpenCode
Instructions for zjgao-spin/Autoresearch_MRsequence, covering agents.md — mri sequence optimization agent, background, what you will do, rules (critical) and calling evaluate().
Instructions file CodexOpenCode
Instructions for epicurrents/core, covering version compliance, or simply, core concepts, key concepts and globals.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: