agentmods.dev

bioinformatics MCP servers

42 tagged bioinformatics, measured the same way as everything else here.

Browse within: multiomics 19precision-medicine 19transcriptomics 19model-context-protocol 18genomics 11llm-tools 9fastmcp 6drug-discovery 5

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hgnc-link

25

berntpopp/hgnc-link

MCP server Claude CodeCodexCursor +2

MCP server "hgnc-link" as configured in berntpopp/hgnc-link. Runs locally from the hgnc-link Python package.

not rated 0 3d ago A tokens not measured

kegg-mcp

26

AriaShishegaran/kegg-mcp

MCP server Claude CodeCodexCursor +2

MCP server "kegg-mcp" as configured in AriaShishegaran/kegg-mcp. Runs locally from the kegg-mcp npm package.

not rated 0 2mo ago A tokens not measured original MIT

orphanet-link

27

berntpopp/orphanet-link

MCP server Claude CodeCodexCursor +2

MCP server "orphanet-link" as configured in berntpopp/orphanet-link. Runs locally from the orphanet-link Python package.

not rated 0 3d ago A tokens not measured original MIT

reactome

28

tc2fh/reactome-mcp

MCP server Claude CodeCodexCursor +2

MCP server "reactome" as configured in tc2fh/reactome-mcp. Runs locally from the /absolute/path/to/reactome-mcp Python package.

not rated 0 2mo ago A tokens not measured original MIT

vepclin-mcp

29

shivankvirdi/VepClin-MCP

MCP server Claude CodeCodexCursor +2

MCP server "vepclin-mcp" as configured in shivankvirdi/VepClin-MCP. Runs locally from the vepclin-mcp Python package.

not rated 0 1mo ago A tokens not measured

seosiri-biometric-iot-bridge-mcp

30

SEOSiri-Official/biometric-iot-bridge-mcp

MCP server Claude CodeCodexCursor +2

MCP server "seosiri-biometric-iot-bridge-mcp" as configured in SEOSiri-Official/biometric-iot-bridge-mcp. Runs locally from the seosiri-biometric-iot-bridge-mcp Python package.

not rated 0 1mo ago A tokens not measured original MIT

scigantic-mcp

31

Scigantic/scigantic-mcp

MCP server Claude CodeCodexCursor +2

MCP server for the Scigantic catalog of public scientific data archives, with LLM-ready schema cards. Runs locally from the scigantic-mcp Python package.

not rated 0 5d ago A tokens not measured MIT-0

researchstat-ai

32

flupke91/ResearchStat-AI

MCP server Claude CodeCodexCursor +2

MCP server "researchstat-ai" as configured in flupke91/ResearchStat-AI. Runs locally from the researchstat-ai Python package.

not rated 0 29d ago A tokens not measured original MIT

computase

33

madhusudan-kulkarni/computase

MCP server Claude CodeCodexCursor +2

Local DNA and RNA sequence utilities for Python and MCP. Runs locally from the computase Python package.

not rated 0 14d ago A tokens not measured original MIT

noodle

34

helena-bioinformatics/noodle-mcp

MCP server Claude CodeCodexCursor +2

MCP server "noodle", hosted remotely at api.helena.bio, as configured in helena-bioinformatics/noodle-mcp.

not rated 0 5d ago A tokens not measured original Apache-2.0

gromacs-mcp

35

Alierkn/gromacs-mcp

MCP server Claude CodeCodexCursor +2

Model Context Protocol server that drives a local GROMACS installation — build, solvate, ionize, run simulations in the background, and analyse trajectories from any MCP client. Runs locally from the gromacs-mcp Python package.

not rated 0 1mo ago A tokens not measured original MIT

vmd-mcp

36

Alierkn/vmd-mcp

MCP server Claude CodeCodexCursor +2

MCP server "vmd-mcp" as configured in Alierkn/vmd-mcp. Runs locally from the vmd-mcp Python package.

not rated 0 3d ago A tokens not measured original MIT