Scientific MCP servers

root-mcp

217

MohamedElashri/root-mcp

MCP server Claude CodeCodexCursor +2

Production-grade MCP server for CERN ROOT file analysis. Runs locally from the root-mcp Python package.

not rated 4 2d ago A tokens not measured original MIT

mcap-mcp-server

218

turkenberg/mcap_mcp_server

MCP server Claude CodeCodexCursor +2

A generic SQL query interface for MCAP robotics data via the Model Context Protocol. Runs locally from the mcap-mcp-server Python package.

not rated 4 +1 7mo ago A tokens not measured GPL-3.0

mcp

219

Sage-Bionetworks/synapse-mcp

MCP server Claude CodeCodexCursor +2

Sage Bionetworks' Synapse server: lets the agent find and read datasets, files and projects on the Synapse research data platform. Remote server at mcp.synapse.org.

not rated 4 5d ago A tokens not measured original MIT

aigroup-paper-mcp

220

jackdark425/aigroup-paper-mcp

MCP server Claude CodeCodexCursor +2

A unified academic paper search and retrieval MCP server integrating 11+ academic platforms. Runs locally from the aigroup-paper-mcp npm package.

not rated 4 7mo ago A tokens not measured original MIT

openfoam-mcp

221

ymg2007/openfoam-mcp

MCP server Claude CodeCodexCursor +2

MCP server "openfoam-mcp" as configured in ymg2007/openfoam-mcp. Runs locally from the openfoam-mcp Python package.

not rated 4 +1 8mo ago A tokens not measured

ouramcp

222

davidmosiah/oura-mcp

MCP server Claude CodeCodexCursor +2

Privacy-first, unofficial Oura MCP server for AI health, sleep, activity and heart-rate agents. Runs locally from the oura-mcp-unofficial npm package. Needs 8 environment variables to run.

not rated 4 2d ago A tokens not measured original MIT

data-aggregator-mcp

223

musharna/data-aggregator-mcp

MCP server Claude CodeCodexCursor +2

Research-data acquisition MCP — find and fetch datasets across archives, omics registries, and literature. Runs locally from the data-aggregator-mcp Python package. Needs 12 environment variables to run.

not rated 4 yesterday A tokens not measured original MIT

igor-pro-bridge

224

byte-physics/igor-bridge-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server "igor-pro-bridge" as configured in byte-physics/igor-bridge-mcp-server. Runs locally from the igor-pro-bridge Python package.

not rated 4 +1 11d ago A tokens not measured

comsol-codex-mcp

225

XiaoSe532/comsol-codex-mcp

MCP server Claude CodeCodexCursor +2

MCP server "comsol-codex-mcp" as configured in XiaoSe532/comsol-codex-mcp. Runs locally from the comsol-codex-mcp Python package.

not rated 4 4mo ago A tokens not measured original MIT

manna

226

NSF-Simons-CosmicAI-Institute/manna

MCP server Claude CodeCodexCursor +2

MANNA — MCP Architecture for NOIRLab, NRAO, and Additional Archives. Runs locally from the manna-mcp Python package. Needs 4 environment variables to run.

not rated 4 2d ago A Socket: warn tokens not measured original MIT

ods

227

totonga/odsbox-jaquel-mcp

MCP server Claude CodeCodexCursor +2

ASAM ODS MCP Server - Query and analyze measurement data from ASAM ODS servers in AI agent systems. Runs locally from the odsbox_jaquel_mcp Python package. Needs 3 environment variables to run.

not rated 4 26d ago A Socket: warn tokens not measured

mcpxquantum

228

PaulGoldschmidt/qsim-mcp

MCP server Claude CodeCodexCursor +2

MCP server "mcpxquantum" as configured in PaulGoldschmidt/qsim-mcp. Runs locally from the mcpxquantum Python package.

not rated 3 1y ago A tokens not measured archived

pubmed-mcp-server

229

hanxuanliang/pubmed-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server "pubmed-mcp-server" as configured in hanxuanliang/pubmed-mcp-server. Runs locally from the pubmed-mcp-server Python package.

not rated 3 1y ago A tokens not measured original MIT

elnora-mcp-server

230

Elnora-AI/elnora-mcp-server

MCP server Claude CodeCodexCursor +2

AI-powered bioprotocol optimization — generate, search, and manage lab protocols via MCP. Runs locally from the @elnora-ai/mcp-server npm package.

not rated 3 today A tokens not measured original Apache-2.0

measure-space-mcp-server

231

MeasureSpace/measure-space-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server for weather, climate, air quality, agriculture, pollen and geocoding from measurespace.io. Runs locally from the @measurespace/measure-space-mcp-server npm package. Needs 7 environment variables to run.

not rated 3 7mo ago A tokens not measured original Apache-2.0

gretl-mcp

232

OndrejLapes/GretlMCP

MCP server Claude CodeCodexCursor +2

Run Hansl/Gretl econometrics workflows via MCP with GUI launch and artifacts. Runs locally from the gretl-mcp npm package. Needs 4 environment variables to run.

not rated 3 4mo ago A tokens not measured original MIT

latex-mcp

233

SepineTam/latex-mcp

MCP server Claude CodeCodexCursor +2

Enable AI agents to compile TeX files with LaTeX inside a Docker container. Runs locally from the latex-mcp Python package.

not rated 3 6mo ago A tokens not measured AGPL-3.0

bbox-mcp-server

234

iamvibhorsingh/bbox-mcp-server

MCP server Claude CodeCodexCursor +2

Geospatial toolkit for AI: spatial queries, coord conversion, H3, OSM search, map verification links. Runs locally from the bbox-mcp-server npm package. Needs 3 environment variables to run.

not rated 3 2mo ago A tokens not measured original MIT

uniprot-mcp

235

smaniches/uniprot-mcp

MCP server Claude CodeCodexCursor +2

Verifiable, release-aware protein evidence workflows over UniProt and linked scientific sources. Runs locally from the uniprot-mcp-server Python package.

not rated 3 yesterday A tokens not measured original Apache-2.0

xraylib-mcp-server

236

tschoonj/xraylib-mcp-server

MCP server Claude CodeCodexCursor +2

Model Context Protocol server for xraylib X-ray interaction data. Runs locally from the xraylib-mcp-server Python package.

not rated 3 6mo ago A tokens not measured original BSD-3-Clause

heatpump-calculator

237

jiweiqi/heatpump-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server "heatpump-calculator" as configured in jiweiqi/heatpump-mcp-server. Runs locally from the . Python package. Needs 3 environment variables to run.

not rated 3 1y ago A tokens not measured original MIT archived

catobot-autoexperiment-mcp-server

238

IamCatoBot/catobot-autoexperiment-mcp

MCP server Claude CodeCodexCursor +2

MCP server "catobot-autoexperiment-mcp-server" as configured in IamCatoBot/catobot-autoexperiment-mcp. Runs locally from the catobot-autoexperiment-mcp-server Python package.

not rated 3 7mo ago A tokens not measured original Apache-2.0

nougat-mcp

239

svretina/nougat-mcp

MCP server Claude CodeCodexCursor +2

MCP server for high-accuracy scientific PDF OCR using Meta's Nougat. Runs locally from the nougat-mcp Python package.

not rated 3 8mo ago A tokens not measured GPL-3.0

crossref-academic-mcp-server

240

AiAgentKarl/crossref-academic-mcp-server

MCP server Claude CodeCodexCursor +2

MCP Server for scientific papers, citations, and academic research — Crossref, OpenAlex, Semantic Scholar. Runs locally from the crossref-academic-mcp-server Python package.

not rated 3 7mo ago A tokens not measured original MIT