Scientific MCP servers

1,355 tagged Scientific, measured the same way as everything else here.

Browse within: mcp-server 332model-context-protocol 292pipeworx 189bioinformatics 58LLM 44agentic-ai 30ai-tools 24fastmcp 23llm-tools 22cyanheads 21arxiv 18climate 15healthcare 15health 14

math-mcp

433

YasogaN/math-mcp

MCP server Claude CodeCodexCursor +2

A comprehensive math MCP server for AI agents. Runs locally from the @yasogan/math-mcp npm package.

not rated 1 1mo ago A tokens not measured original MIT

banana

434

Developer-Akademie-YouTube/Banana_MCP_Tutorial

MCP server Claude CodeCodexCursor +2

Brain imAgiNg Analysis iN Arcana (Banana): brain imaging analysis workflows implemented in the Arcana framework (arcana.readthedocs.io). Runs locally from the banana Python package.

not rated 1 2mo ago A tokens not measured

arxiv-mcp

435

Tejas242/arxiv-mcp

MCP server Claude CodeCodexCursor +2

A simple MCP server to fetch the content of ArXiv papers. Runs locally from the arxiv-mcp Python package.

not rated 1 10mo ago A tokens not measured

weather

436

peican996/weather-mcp

MCP server Claude CodeCodexCursor +2

PyWeather branch; bindings for Davis Vantage Pro and Pro2 weather stations, upload of weather data (e.g. wunderground.com), and meteorological calculation/conversion functions. Runs locally from the weather Python package.

not rated 1 2mo ago A tokens not measured

carbon-factor-matcher

437

Nikeandocean/carbon-factor-matcher

MCP server Claude CodeCodexCursor +2

MCP server for intelligent emission factor matching — connects AI agents with carbon emission factor databases (ELCD, ecoinvent). Runs locally from the @nikeandocean/carbon-factor-matcher npm package.

not rated 1 8d ago A tokens not measured

symbolic_math_mcp

438

BrosnanYuen/symbolic_math_mcp

MCP server Claude CodeCodexCursor +2

FastMCP server for validating symbolic math YAML files with symbolic-math-verify. Runs locally from the symbolic_math_mcp Python package.

not rated 1 1mo ago A tokens not measured GPL-3.0

dymola

439

simonluke/dymola-mcp

MCP server Claude CodeCodexCursor +2

MCP server "dymola" as configured in simonluke/dymola-mcp. Runs path/to/dymola_mcp_server.py with python.

not rated 1 2mo ago A tokens not measured original MIT

zemax-mcp

440

dongzhaohe321418-lab/zemax-mcp

MCP server Claude CodeCodexCursor +2

MCP server "zemax-mcp" as configured in dongzhaohe321418-lab/zemax-mcp. Runs locally from the zemax-mcp Python package.

not rated 1 21d ago A tokens not measured

pymemsim-mcp

441

sinagilassi/PyMemSim-MCP

MCP server Claude CodeCodexCursor +2

PyMemSim-MCP is an MCP-enabled extension of PyMemSim that integrates model-source-driven thermodynamic data with membrane process simulations.It enables LLMs and agents to interact with membrane models through standardized, machine-readable inputs, ensuring unit consistency, reproducibility, and reliable AI-assisted…

not rated 1 14d ago A tokens not measured original Apache-2.0

hpo-link

442

berntpopp/hpo-link

MCP server Claude CodeCodexCursor +2

MCP server "hpo-link" as configured in berntpopp/hpo-link. Runs locally from the hpo-link Python package.

not rated 1 2d ago A tokens not measured original MIT

psychopy

443

hackerunner/psychopy-mcp

MCP server Claude CodeCodexCursor +2

MCP server "psychopy" as configured in hackerunner/psychopy-mcp. Launched with C:\Users\A\psychopy-mcp\.venv\Scripts\python.exe -m psychopy_mcp.server. Needs 1 environment variable to run.

not rated 1 2mo ago A tokens not measured original MIT

pythermocalcdb-nasa

444

sinagilassi/PyThermoCalcDB-NASA-MCP

MCP server Claude CodeCodexCursor +2

MCP server and orchestration layer for pythermocalcdb-nasa thermodynamic calculations. Runs locally from the pythermocalcdb-nasa-mcp Python package.

not rated 1 21d ago A tokens not measured original Apache-2.0

biocontext-ai/nucleotide_archive_mcp

MCP server Claude CodeCodexCursor +2

MCP server for searching European Nucleotide Archive (ENA) datasets. Find RNA-seq studies, retrieve metadata, and discover related publications to validate research hypotheses. Runs locally from the nucleotide-archive-mcp Python package.

not rated 1 6mo ago A tokens not measured original Apache-2.0

JimFlannery/space_weather_data_mcp

MCP server Claude CodeCodexCursor +2

MCP server "space-weather-data-mcp" as configured in JimFlannery/spaceweatherdatamcp. Runs locally from the space-weather-data-mcp Python package.

not rated 1 6mo ago A tokens not measured original MIT

nih-umls-mcp

447

feordin/nih-umls-mcp

MCP server Claude CodeCodexCursor +2

MCP server for the NIH UMLS (Unified Medical Language System) API. Runs locally from the nih-umls-mcp Python package.

not rated 1 4mo ago A tokens not measured original MIT

secure-cluster-mcp

448

FlorianSp2000/secure-cluster-mcp

MCP server Claude CodeCodexCursor +2

MCP server for SLURM cluster interactions enabling end-to-end AI-assisted coding workflows. Runs locally from the secure-cluster-mcp Python package.

not rated 1 3mo ago A tokens not measured original MIT

rstudio

449

lerlerchan/rstudio-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server "rstudio" as configured in lerlerchan/rstudio-mcp-server. Runs /mnt/d/rstudio-mcp-server/build/index.js with node.

not rated 1 10mo ago A tokens not measured

statlab-mcp

450

good-boy4069/statlab-mcp

MCP server Claude CodeCodexCursor +2

A local MCP server offering 30 statistical-analysis tools based on pure calculations. It is designed to give an AI agent reproducible and traceable statistical results.

not rated 1 13d ago A tokens not measured original MIT

arxiv-mcp-server

451

RatnamOjha/arvix-mcp-server

MCP server Claude CodeCodexCursor +2

A flexible arXiv search and analysis service with MCP protocol support. Runs locally from the arxiv-mcp-server Python package.

not rated 1 4mo ago A tokens not measured

gnuradio-mcp-server

452

Pranav-d33/gnuradio-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server for controlling and querying GNU Radio SDR flowgraphs. Runs locally from the gnuradio-mcp-server Python package.

not rated 1 2mo ago A tokens not measured original MIT

lean-mcp

453

KrystianYCSilva/lean-mcp

MCP server Claude CodeCodexCursor +2

MCP server and client for Lean 4 + Mathlib formal verification. Runs locally from the lean-mcp Python package. Needs 1 environment variable to run.

not rated 1 6mo ago A tokens not measured original MIT

geant4-simulation

454

abhich2507/geant4-mcp

MCP server Claude CodeCodexCursor +2

MCP server "geant4-simulation" as configured in abhich2507/geant4-mcp. Runs in Docker (/workspace/mcp_server.py). Needs 1 environment variable to run.

not rated 1 8mo ago A tokens not measured

arxivsmart

455

florianbuetow/arxiv-smart-mcp

MCP server Claude CodeCodexCursor +2

MCP server "arxivsmart" as configured in florianbuetow/arxiv-smart-mcp. Runs locally from the arxivsmart Python package.

not rated 1 7mo ago A tokens not measured original MIT

geospatial-tools-mcp

456

gifro10/geospatial-tools-mcp

MCP server Claude CodeCodexCursor +2

MCP server "geospatial-tools-mcp" as configured in gifro10/geospatial-tools-mcp. Runs locally from the geospatial-tools-mcp Python package.

not rated 1 7mo ago A tokens not measured original MIT