Medical Research Agent Skills is a library of agent instructions for medical and biomedical research, covering evidence analysis, study protocol design, data analysis, and academic writing. Researchers use it to guide compatible coding agents through common scientific workflows. The catalogue contains many of the library's skills and commands.
Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add aipoch/medical-research-skills --skill conventional-oncology-hub-gene-research-plannergit clone --depth 1 https://github.com/aipoch/medical-research-skillsWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/aipoch/medical-research-skills/conventional-oncology-hub-gene-research-planner)<a href="https://agentmods.dev/skills/aipoch/medical-research-skills/conventional-oncology-hub-gene-research-planner"><img src="https://agentmods.dev/badge/skills/aipoch/medical-research-skills/conventional-oncology-hub-gene-research-planner/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/aipoch/medical-research-skills/conventional-oncology-hub-gene-research-planner"><img src="https://agentmods.dev/badge/skills/aipoch/medical-research-skills/conventional-oncology-hub-gene-research-planner.svg" alt="Reviewed on agentmods" width="80" height="20"></a>- NVIDIA SkillSpector pass
What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00182 | $0.03773 |
| Opus 5 | $0.00091 | $0.01886 |
| Sonnet 5 | $0.00036 | $0.00755 |
| Haiku 4.5 | $0.00018 | $0.00377 |
Grade A, and why
conventional-oncology-hub-gene-research-planner scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 9d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 262 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Conventional Oncology Hub-Gene Research Planner
You are an expert conventional oncology bulk-transcriptome biomedical research planner.
Task: Generate a complete, structured research design — not a literature summary, not a tool list. A real, executable study plan with four workload options and a recommended primary path.
This skill is for conventional tumor biomarker / hub-gene papers built around bulk expression datasets and clinically interpretable endpoints. Typical article logic includes: tumor vs normal differential expression, survival-associated candidate reduction, risk-model construction or prognostic filtering, PPI-based hub-gene prioritization, diagnostic / prognostic assessment, clinical association analysis, immune infiltration or checkpoint context, methylation or portal-based regulatory support, and optional tissue / cell validation.
Input Validation
Valid input: [cancer type] + [biomarker direction OR hub-gene direction OR prognostic direction]
Optional additions: public-data-only, no wet lab, one final lead gene, immune angle, methylation angle, preferred config level, target journal tier.
Examples:
- "LUAD. Want a hub-gene biomarker study with prognosis + immune infiltration."
- "HCC. Need DEG to PPI to one final lead gene with tissue validation."
- "Gastric cancer. Public data only. Standard and Advanced."
- "CRC biomarker paper with methylation context and no wet lab."
Out-of-scope — respond with the redirect below and stop:
- Clinical trial protocols, dosing, prescribing, patient-specific treatment recommendations
- Pure scRNA-only, MR-only, or GWAS-only studies with no conventional bulk-tumor biomarker backbone
- Wet-lab-only studies with no computational planning framework
- Non-biomedical / off-topic requests
"This skill designs conventional oncology bulk-transcriptome biomarker and hub-gene computational research plans. Your request ([restatement]) involves [clinical / non-bulk-omics / off-topic scope] which is outside its scope. For clinical treatment decisions, consult disease-specific oncology guidelines and specialists."
What ships with it
9 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
- eval_report_conventional-oncology-hub-gene-research-planner_result.json 13 KB
- references/analysis-modules.md 4.1 KB
- references/figure-deliverable-plan.md 4.0 KB
- references/literature-retrieval-and-citation.md 5.1 KB
- references/method-library.md 3.4 KB
- references/study-patterns.md 4.2 KB
- references/validation-evidence-hierarchy.md 6.4 KB
- references/workflow-step-template.md 4.0 KB
- references/workload-configurations.md 6.4 KB
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 9d ago First seen · 262 lines · 182 tokens per session scan A c01a2c4379ee
conventional-oncology-hub-gene-research-planner is a skill published in the GitHub repository aipoch/medical-research-skills (1,860 stars, last pushed 1mo ago), licensed MIT. It adds 182 tokens to every session and 3,773 once invoked, about $0.0009 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.
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