Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-clinical-reportsgit clone --depth 1 https://github.com/AlterLab-IEU/AlterLab-Academic-SkillsWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/alterlab-ieu/alterlab-academic-skills/alterlab-clinical-reports)<a href="https://agentmods.dev/skills/alterlab-ieu/alterlab-academic-skills/alterlab-clinical-reports"><img src="https://agentmods.dev/badge/skills/alterlab-ieu/alterlab-academic-skills/alterlab-clinical-reports/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/alterlab-ieu/alterlab-academic-skills/alterlab-clinical-reports"><img src="https://agentmods.dev/badge/skills/alterlab-ieu/alterlab-academic-skills/alterlab-clinical-reports.svg" alt="Reviewed on agentmods" width="80" height="20"></a>- NVIDIA SkillSpector pass
What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00133 | $0.02316 |
| Opus 5 | $0.00067 | $0.01158 |
| Sonnet 5 | $0.00027 | $0.00463 |
| Haiku 4.5 | $0.00013 | $0.00232 |
Grade A, and why
alterlab-clinical-reports scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 187 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Clinical Report Writing
Overview
Document medical information with precision, accuracy, and regulatory compliance. This skill covers four report families: case reports for journal publication, diagnostic reports for clinical practice (radiology, pathology, lab), clinical trial reports for regulatory submission (SAE, CSR), and patient documentation for medical records (SOAP, H&P, discharge).
Critical principle: clinical reports must be accurate, complete, objective, and compliant with applicable regulations (HIPAA, FDA, ICH-GCP). Patient privacy and data integrity are paramount.
When to Use This Skill
Use when:
- Writing a clinical case report for journal submission (CARE guidelines)
- Creating a diagnostic report (radiology, pathology, laboratory)
- Documenting clinical trial data, SAE narratives, or a CSR (ICH-E3)
- Writing SOAP notes, H&P, discharge summaries, or consult notes
- Ensuring HIPAA compliance and proper de-identification
- Validating clinical documentation for completeness and accuracy
Core Workflow
- Pick the report family and load its detailed reference (see index below).
- Draft from the template in
assets/for that report type. - Apply regulatory controls — de-identify, document consent, meet timelines.
- Validate with the matching
scripts/validator before sign-out. - Final QA against the checklist at the end of this file.
1. Case reports for journal publication
Follow the CARE (CAse REport) checklist: title, keywords, structured abstract,
introduction, patient information, clinical findings, timeline, diagnostic
assessment, therapeutic interventions, follow-up/outcomes, discussion, patient
perspective, and informed consent. Mind journal-specific limits (word count,
figures, reference style) and de-identify before submission.
→ Element-by-element detail, journal requirements, and the 18 HIPAA identifiers:
references/care_report_sections.md. High-level checklist: references/case_report_guidelines.md.
What ships with it
34 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
- assets/case_report_template.md 9.5 KB
- assets/clinical_trial_csr_template.md 9.0 KB
- assets/clinical_trial_sae_template.md 10 KB
- assets/consult_note_template.md 7.2 KB
- assets/discharge_summary_template.md 12 KB
- assets/hipaa_compliance_checklist.md 12 KB
- assets/history_physical_template.md 9.0 KB
- assets/lab_report_template.md 8.3 KB
- assets/pathology_report_template.md 6.5 KB
- assets/quality_checklist.md 9.7 KB
- assets/radiology_report_template.md 7.8 KB
- assets/soap_note_template.md 7.1 KB
- evals/evals.json 5.0 KB
- references/care_report_sections.md 5.6 KB
- references/case_report_guidelines.md 18 KB
- references/clinical_trial_report_structures.md 5.7 KB
- references/clinical_trial_reporting.md 20 KB
- references/data_presentation.md 21 KB
- references/diagnostic_report_templates.md 6.2 KB
- references/diagnostic_reports_standards.md 18 KB
- references/medical_terminology.md 15 KB
- references/patient_documentation.md 21 KB
- references/patient_record_formats.md 6.2 KB
- references/peer_review_standards.md 15 KB
- references/README.md 2.1 KB
- references/regulatory_compliance.md 17 KB
- scripts/check_deidentification.py 11 KB runs code
- scripts/compliance_checker.py 2.1 KB runs code
- scripts/extract_clinical_data.py 2.6 KB runs code
- scripts/format_adverse_events.py 3.0 KB runs code
- scripts/generate_report_template.py 4.6 KB runs code
- scripts/terminology_validator.py 4.0 KB runs code
- scripts/validate_case_report.py 11 KB runs code
- scripts/validate_trial_report.py 2.8 KB runs code
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 11d ago First seen · 187 lines · 133 tokens per session scan A 7c71e38b9327
alterlab-clinical-reports is a skill published in the GitHub repository AlterLab-IEU/AlterLab-Academic-Skills (66 stars, last pushed 6d ago), licensed MIT. It adds 133 tokens to every session and 2,316 once invoked, about $0.0007 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
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