alterlab-research-pipeline

alterlab-research-pipeline is a skill for Claude Code from AlterLab-IEU/AlterLab-Academic-Skills. It costs 126 tokens per session (6,771 once invoked), scanned A, original, MIT.

An academic workflow coordinator that guides a research paper through research, writing, integrity checks, peer review, revisions, and finalization. It tracks progress and asks for confirmation between stages.

In plain words
What is it for?
Use it to manage a full research-to-publication process, coordinate specialist tools, track stage progress, and create a record of the human–AI work.
Why use it?
It keeps a complex paper project organized and prevents later stages from starting before required checks are complete.

Skill for Claude Code

Written for Claude Code: allowed-tools in frontmatter.

Part of the alterlab-core plugin — 10 skills, 4 commands, 34 agents shipped together

Good fit Use it to manage a full research-to-publication process, coordinate specialist tools, track stage progress, and create a record of the human–AI work.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-research-pipeline
Clone the repo
git clone --depth 1 https://github.com/AlterLab-IEU/AlterLab-Academic-Skills

Made for: Claude Code.

Or install alterlab-core, the plugin that ships this one along with the rest of its 10 skills, 4 commands, 34 agents.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for alterlab-research-pipeline

README.md
[![agentmods](https://agentmods.dev/badge/skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline/github.svg)](https://agentmods.dev/skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline)
Your own site
<a href="https://agentmods.dev/skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline"><img src="https://agentmods.dev/badge/skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for alterlab-research-pipeline

Your own site · 80×15
<a href="https://agentmods.dev/skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline"><img src="https://agentmods.dev/badge/skills/alterlab-ieu/alterlab-academic-skills/alterlab-research-pipeline.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 126 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 6,771 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00126 $0.06771
Opus 5 $0.00063 $0.03386
Sonnet 5 $0.00025 $0.01354
Haiku 4.5 $0.00013 $0.00677

Measured 8d ago against content hash f633869bacd5, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-11, from the pricing page.

Security

Grade A, and why

alterlab-research-pipeline scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 8d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/core/alterlab-research-pipeline/SKILL.md · 453 lines

How it starts

The opening of the file, as written. The whole thing — 453 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Academic Pipeline v2.6 — Full Academic Research Workflow Orchestrator

A lightweight orchestrator that manages the complete academic pipeline from research exploration to final manuscript. It does not perform substantive work — it only detects stages, recommends modes, dispatches skills, manages transitions, and tracks state.

v2.0 Core Improvements:

  1. Mandatory user confirmation checkpoints — Each stage completion requires user confirmation before proceeding to the next step
  2. Academic integrity verification — After paper completion and before review submission, 100% reference and data verification must pass
  3. Two-stage review — First full review + post-revision focused verification review
  4. Final integrity check — After revision completion, re-verify all citations and data are 100% correct
  5. Reproducible — Standardized workflow producing consistent quality assurance each time
  6. Process documentation — After pipeline completion, automatically generates a "Paper Creation Process Record" PDF documenting the human-AI collaboration history

Quick Start

Full workflow (from scratch):

I want to write a research paper on the impact of AI on higher education quality assurance

--> alterlab-research-pipeline launches, starting from Stage 1 (RESEARCH)

Mid-entry (existing paper):

I already have a paper, help me review it

--> alterlab-research-pipeline detects mid-entry, starting from Stage 2.5 (INTEGRITY)

Revision mode (received reviewer feedback):

I received reviewer comments, help me revise

--> alterlab-research-pipeline detects, starting from Stage 4 (REVISE)

Execution flow:

  1. Detect the user's current stage and available materials
  2. Recommend the optimal mode for each stage
  3. Dispatch the corresponding skill for each stage
  4. After each stage completion, proactively prompt and wait for user confirmation
  5. Track progress throughout; Pipeline Status Dashboard available at any time

Read the full file on GitHub · 453 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 8d ago First seen · 453 lines · 126 tokens per session scan A f633869bacd5

Subscribe to this mod's changes

alterlab-research-pipeline is a skill published in the GitHub repository AlterLab-IEU/AlterLab-Academic-Skills (66 stars, last pushed 7d ago), licensed MIT. It adds 126 tokens to every session and 6,771 once invoked, about $0.0006 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

Related

Other skills, from other repositories

academic-slides

Create Beamer-inspired academic HTML presentations from scratch or by converting PowerPoint files. Use when the user wants to build slides for a conference talk, lecture, seminar, or thesis defense. Supports theorem environments, KaTeX equations, algorithm pseudocode, and citations. Helps academics discover their…

Nero1688/claude-academic-skills · 74 tokens

ob-hrm-scale-adaptor

A guide for adapting organisational behaviour and human-resources survey scales across languages and cultures. It covers permission checks, translation and back-translation, expert review, participant interviews, and tests of whether groups interpret the scale comparably.

Nero1688/claude-academic-skills · 318 tokens

r-spss-syntax-architect

A guide for turning research hypotheses into repeatable R or SPSS code for statistical analysis. It covers panel data, where the same companies or other units are observed over time, as well as interaction effects, curves, and mediation.

Nero1688/claude-academic-skills · 406 tokens

phd-milestone-tracker

A tracker for planning and monitoring the academic milestones of working business doctoral students.

Nero1688/claude-academic-skills · 394 tokens

q1-journal-reviewer

A simulated anonymous review by a demanding business-research journal referee. It examines a complete paper for contribution, causal reasoning, robustness checks, mechanisms, and the difference between statistical and real-world importance.

Nero1688/claude-academic-skills · 353 tokens

tej-data-scout

A research-planning guide that checks whether a proposed study can use data from a database such as TEJ, Taiwan’s financial and economic data service. It breaks the topic into variables, finds likely data sections, checks coverage and frequency, and notes gaps that still need confirmation.

Nero1688/claude-academic-skills · 233 tokens