Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add Azealoo/miniAgent --skill scrna_qc_checklistgit clone --depth 1 https://github.com/Azealoo/miniAgentWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/azealoo/miniagent/scrna_qc_checklist)<a href="https://agentmods.dev/skills/azealoo/miniagent/scrna_qc_checklist"><img src="https://agentmods.dev/badge/skills/azealoo/miniagent/scrna_qc_checklist/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/azealoo/miniagent/scrna_qc_checklist"><img src="https://agentmods.dev/badge/skills/azealoo/miniagent/scrna_qc_checklist.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00027 | $0.00651 |
| Opus 5 | $0.00014 | $0.00326 |
| Sonnet 5 | $0.00005 | $0.00130 |
| Haiku 4.5 | $0.00003 | $0.00065 |
Grade A, and why
scRNA_qc_checklist scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 9d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
The source is not reproduced here
No licence file
A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 9d ago First seen · 59 lines · 27 tokens per session scan A f9b650bb2f91
scRNA_qc_checklist is a skill published in the GitHub repository Azealoo/miniAgent (2 stars, last pushed 3mo ago), with no licence file. It adds 27 tokens to every session and 651 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.
Other skills, from other repositories
sc-filter
Load when removing low-quality cells and lowly-detected genes from a single-cell AnnData using QC-derived thresholds or tissue presets. Skip when the full normalize→HVG→PCA→cluster pipeline (use sc-preprocessing); reads are still raw FASTQ (use sc-fastq-qc).
sc-qc
Load when computing per-cell QC metrics (ngenes, total counts, mt%, ribo%) on a single-cell AnnData before filtering. Skip when reads are still raw FASTQ (use sc-fastq-qc); you want to filter cells now (use sc-filter).
sc-fastq-qc
Load when checking raw single-cell FASTQ read quality (Phred / GC / adapter / length) before counting. Skip when reads are already counted (use sc-qc); bulk FASTQ (use bulkrna-read-qc).
protein-qc
Quality control metrics and filtering thresholds for protein design. Use this skill when: (1) Evaluating design quality for binding, expression, or structure, (2) Setting filtering thresholds for pLDDT, ipTM, PAE, (3) Checking sequence liabilities (cysteines, deamidation, polybasic clusters), (4) Creating multi-stage…
protein-design-qc
Protein design quality control, filtering thresholds, and ranking guidance. Use this skill when: (1) Evaluating design quality for binding, expression, or structure, (2) Setting filtering thresholds for pLDDT, ipTM, PAE, (3) Checking sequence liabilities (cysteines, deamidation, polybasic clusters), (4) Creating…
protein-qc
Quality control metrics and filtering thresholds for protein design. Use this skill when: (1) Evaluating design quality for binding, expression, or structure, (2) Setting filtering thresholds for pLDDT, ipTM, PAE, (3) Checking sequence liabilities (cysteines, deamidation, polybasic clusters), (4) Creating multi-stage…