template-literature-synthesis

template-literature-synthesis is a skill for Claude Code, Codex from docxology/template. It costs 65 tokens per session (615 once invoked), scanned A, original, Apache-2.0.

A set of AI prompt templates for analyzing research papers individually or as a group after a literature search. It organizes contributions, methods, evidence, limitations, themes, and open questions.

In plain words
What is it for?
It helps create per-paper notes, group papers into themes, identify agreements and gaps, and propose experiments that address unanswered questions.
Why use it?
It turns a collection of papers into consistent notes and makes it easier to compare findings instead of reading disconnected summaries.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit It helps create per-paper notes, group papers into themes, identify agreements and gaps, and propose experiments that address unanswered questions.

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Install with agentmods
npx agentmods add skills/docxology/template/literature-synthesis
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add docxology/template --skill literature-synthesis
Clone the repo
git clone --depth 1 https://github.com/docxology/template

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for template-literature-synthesis

README.md
[![agentmods](https://agentmods.dev/badge/skills/docxology/template/literature-synthesis/github.svg)](https://agentmods.dev/skills/docxology/template/literature-synthesis)
Your own site
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agentmods 80×15 button for template-literature-synthesis

Your own site · 80×15
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Per session 65 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 615 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00065 $0.00615
Opus 5 $0.00032 $0.00308
Sonnet 5 $0.00013 $0.00123
Haiku 4.5 $0.00006 $0.00061

Measured 10d ago against content hash e4c106050e37, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-10, from the pricing page.

Security

Grade A, and why

template-literature-synthesis scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 10d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

docs/prompts/literature-synthesis/SKILL.md · 82 lines

What it actually says

Literature synthesis

Prompt blocks for infrastructure.llm or project synthesis.py after literature search.

Natural invoke

  • "Synthesize these 12 papers into thematic clusters with citation keys"
  • "Per-paper structured notes: contribution, method, evidence, limitation"
  • "Gap analysis: what experiments would close open questions?"

Inputs to confirm

  • Corpus — list of papers (title, authors, year, abstract, optional fulltext).
  • Goal paragraph — for gap-analysis variant only.

Paper block format

Each paper renders as:

### {citation_key} — {title} ({year})
**Authors:** {authors}
**DOI / URL:** {doi or url}
**Abstract:** {abstract}

Workflows

Per-paper analysis

Structured note: CONTRIBUTION (one sentence), METHOD (2–3 bullets), EVIDENCE (2–3 bullets), LIMITATION (one bullet), TAGS (3–7 lowercase). Cite as [{citation_key}].

Cross-paper synthesis

Group into 3–7 thematic clusters; summarise dominant approach; agreements/disagreements; 3 open questions. Cite only corpus keys in square brackets.

Gap analysis

Given GOAL + corpus: per paper COVERS/LACKS sub-claims; propose 3 follow-up experiments. Cite by key.

Style

  • Bracket-key citations only — not bare titles.
  • Bound input: truncate fulltext; temperature=0.0, seed=42 for replay.
  • Optional second pass: infrastructure.llm.validation.validate_complete.

Verification

When NOT to use

  • Running literature search backendsinfrastructure/search/ and project search scripts
  • New manuscript from scratchmanuscript-creation

References

Full prompt text and programmatic example: references/prompt-blocks.md

Files

What ships with it

5 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 10d ago First seen · 82 lines · 65 tokens per session scan A e4c106050e37

Subscribe to this mod's changes

template-literature-synthesis is a skill published in the GitHub repository docxology/template (19 stars, last pushed today), licensed Apache-2.0. It adds 65 tokens to every session and 615 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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