What is template-methods-orchestration?

A repository-wide workflow for connecting research methods to project stages, method contracts, artifacts, and evidence. A method contract defines what a method needs and produces.

Use it to add, audit, improve, or validate methodology sections, stage wiring, artifact records, and evidence provenance across research projects.

It helps ensure the documented methods match the project pipeline and that results can be traced back to their evidence.

template-methods-orchestration — Skill for Claude Code and Codex by docxology: A repository-wide workflow for connecting research methods to

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods

npx agentmods add skills/docxology/template/methods-orchestration

Any agent

npx skills add docxology/template --skill methods-orchestration

Clone the repo

git clone --depth 1 https://github.com/docxology/template

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

README.md

[![agentmods](https://agentmods.dev/badge/skills/docxology/template/methods-orchestration.svg)](https://agentmods.dev/skills/docxology/template/methods-orchestration)

Your own site

<a href="https://agentmods.dev/skills/docxology/template/methods-orchestration"><img src="https://agentmods.dev/badge/skills/docxology/template/methods-orchestration.svg" alt="Measured on agentmods" height="20"></a>

Per session 61 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.

When invoked 591 The whole file, excluding the scripts and references it only reads on demand.

Security scan A 0 findings. Scan, not verified.

Origin original No closer match found in the catalogue.

Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

Model	Per session	Once invoked
Fable 5	$0.00061	$0.00591
Opus 5	$0.00030	$0.00296
Sonnet 5	$0.00012	$0.00118
Haiku 4.5	$0.00006	$0.00059

Measured 3d ago against content hash 2753f2c63fb7, method: parsed. Prices are Anthropic first-party input rates as of 2026-08-30, from the pricing page.

Security

Grade A, and why

template-methods-orchestration scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 3d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

docs/prompts/methods-orchestration/SKILL.md · 64 lines

What it actually says

Methods orchestration

Natural invoke

"Improve all methods orchestration repo-wide"
"Make sure methods match the pipeline and artifacts"
"Audit methodology sections against stage contracts"
"Add method contract validation for this project"

Workflow

Build the plan - run infrastructure.methods for one project or --all-public.
Check surfaces - manuscript methods files, pipeline.yaml stage contracts, artifact manifest, evidence registry, and validation commands.
Repair source layers - update src/, thin scripts, manuscript source, or stage contracts. Do not edit generated output/ as a fix.
Regenerate and validate - run core pipeline or focused stage commands, then rerun methods plan with --check.
Document routing - update AGENTS/README when method ownership or commands changed.

Verification commands

uv run python -m infrastructure.methods plan --project <project> --format markdown
uv run python -m infrastructure.methods plan --project <project> --format json --check
uv run python -m infrastructure.methods plan --all-public --artifact-mode source --format json
uv run python -m infrastructure.methods plan --all-public --artifact-mode rendered --format json
uv run python scripts/runner/execute_pipeline.py --project <project> --core-only
uv run python -m infrastructure.validation.cli prerender projects/<project>/manuscript --repo-root .
uv run pytest tests/infra_tests/methods -q

Handoffs

Broken stage behavior -> pipeline-debugging
Evidence/claim mismatch -> manuscript-claim-verification
Rebuild drift -> reproducibility-audit
Validation CLI failures -> validation-quality

Files

What ships with it

2 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

3d ago First seen · 64 lines · 61 tokens per session scan A 2753f2c63fb7

Subscribe to this mod's changes

template-methods-orchestration is a skill published in the GitHub repository docxology/template (19 stars, last pushed 3d ago), licensed Apache-2.0. It adds 61 tokens to every session and 591 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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