crossref-lookup

crossref-lookup is a skill for Claude Code, Codex from fmschulz/omics-skills. It costs 31 tokens per session (1,139 once invoked), scanned A, original, MIT.

A citation lookup tool that uses Crossref, a public database of scholarly publication records, to check DOIs and retrieve reference details.

In plain words
What is it for?
Use it to validate DOI strings, find a DOI from a title, retrieve citation metadata, or audit a bibliography.
Why use it?
It helps correct incomplete or inaccurate citations and exposes ambiguous matches instead of silently choosing the wrong paper.

Skill for Claude CodeCodex

Written for Claude Code and Codex: shipped in a Claude Code plugin, but also agents/openai.yaml present.

Part of the omics-skills plugin — 34 skills, 4 agents shipped together

Good fit Use it to validate DOI strings, find a DOI from a title, retrieve citation metadata, or audit a bibliography.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/fmschulz/omics-skills/crossref-lookup
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add fmschulz/omics-skills --skill crossref-lookup
Clone the repo
git clone --depth 1 https://github.com/fmschulz/omics-skills

Made for: Claude Code, Codex.

Or install omics-skills, the plugin that ships this one along with the rest of its 34 skills, 4 agents.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for crossref-lookup

README.md
[![agentmods](https://agentmods.dev/badge/skills/fmschulz/omics-skills/crossref-lookup.svg)](https://agentmods.dev/skills/fmschulz/omics-skills/crossref-lookup)
Your own site
<a href="https://agentmods.dev/skills/fmschulz/omics-skills/crossref-lookup"><img src="https://agentmods.dev/badge/skills/fmschulz/omics-skills/crossref-lookup.svg" alt="Measured on agentmods" height="20"></a>
Per session 31 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,139 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00031 $0.01139
Opus 5 $0.00015 $0.00570
Sonnet 5 $0.00006 $0.00228
Haiku 4.5 $0.00003 $0.00114

Measured yesterday against content hash 275e3060c20e, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

crossref-lookup scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured yesterday.

The scan reads SKILL.md. This mod also ships 1 executable file (scripts/lookup.py), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/crossref-lookup/SKILL.md · 113 lines

How it starts

The opening of the file, as written. The whole thing — 113 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Crossref Lookup

Use this skill for citation metadata work backed by the Crossref REST API.

Instructions

  1. Prefer this skill when the user needs DOI validation, title search, citation metadata, or bibliography auditing.
  2. Use the bundled CLI:
    • In this repository: skills/crossref-lookup/scripts/lookup
    • After installation: ~/.agents/skills/crossref-lookup/scripts/lookup
  3. Choose the narrowest mode that matches the request:
    • --doi for validating or enriching one DOI
    • --title for title-to-DOI discovery
    • --validate-file for one DOI per line
    • --audit-bibliography for a bibliography file such as .bib or plain text
  4. Normalize DOI strings before interpreting failures.
    • Acceptable raw forms include 10.xxxx/..., doi:10.xxxx/..., and https://doi.org/10.xxxx/...
  5. If the user has a contact email for polite-pool requests, pass it with --email.
  6. Treat Crossref as citation metadata, not full text.
    • If exact abstract-page wording, final pagination, or publisher formatting matters, verify the shortlisted record on the publisher or DOI landing page.
  7. When title search returns multiple plausible records, keep the ambiguity explicit instead of selecting a match silently.
  8. Use --strict for audits that must fail on malformed, missing, or unresolved records. Exit code 2 denotes a transient service/network failure; exit code 1 denotes invalid, missing, or other audit failures.

Quick Reference

Task Action
Validate DOI skills/crossref-lookup/scripts/lookup --doi 10.1038/nature12373
Search by title skills/crossref-lookup/scripts/lookup --title "CRISPR-Cas9 genome editing"
Validate a DOI list skills/crossref-lookup/scripts/lookup --validate-file dois.txt
Audit bibliography skills/crossref-lookup/scripts/lookup --audit-bibliography refs.bib
Write to file --output crossref-report.txt
Polite-pool email --email [email protected]
Strict audit --strict returns nonzero for unresolved records

Read the full file on GitHub · 113 lines

Files

What ships with it

3 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. yesterday Changed · -2 lines 275e3060c20e
  2. 7d ago First seen · 115 lines · 31 tokens per session scan A a272403d5e27

Subscribe to this mod's changes

crossref-lookup is a skill published in the GitHub repository fmschulz/omics-skills (7 stars, last pushed yesterday), licensed MIT. It adds 31 tokens to every session and 1,139 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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