agentmods.dev

omics-skills

omics-skills is a plugin for Claude Code from fmschulz/omics-skills. Its manifest loads nothing; the 35 skills, 4 agents it bundles cost 1,543 tokens per session together, scanned A, original, MIT.

A collection of coding-agent tools for bioinformatics, finding scientific papers, scientific writing, and data visualization. Bioinformatics uses software to analyze biological data.

In plain words
What is it for?
Analyzing biological data, discovering literature, preparing scientific text, and creating data visualizations.
Why use it?
It brings several research-focused workflows together for scientific computing tasks. This can reduce the need to assemble separate instructions for each type of analysis.

Plugin for Claude Code

not rated 7 9d ago A scan tokens not measured original MIT
View the source file fmschulz/omics-skills
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Claude Code
/plugin marketplace add fmschulz/omics-skills
agentmods
npx agentmods add plugins/fmschulz/omics-skills/omics-skills
Clone the repo
git clone --depth 1 https://github.com/fmschulz/omics-skills

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for omics-skills

README.md
[![agentmods](https://agentmods.dev/badge/plugins/fmschulz/omics-skills/omics-skills.svg)](https://agentmods.dev/plugins/fmschulz/omics-skills/omics-skills)
Your own site
<a href="https://agentmods.dev/plugins/fmschulz/omics-skills/omics-skills"><img src="https://agentmods.dev/badge/plugins/fmschulz/omics-skills/omics-skills.svg" alt="Measured on agentmods" height="20"></a>
Per session not measured What this adds to a session before it is invoked.
When invoked not measured The manifest loads nothing itself; its 35 skills, 4 agents cost 1,543 tokens a session between them.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Security

Grade A, and why

omics-skills scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 3d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude-plugin/plugin.json · 21 lines

What it actually says

{
  "name": "omics-skills",
  "displayName": "Omics Skills",
  "description": "Bioinformatics, literature discovery, scientific writing, and data visualization agents and skills for Claude Code and Cowork.",
  "version": "1.6.0",
  "author": {
    "name": "Frederik Schulz"
  },
  "homepage": "https://fmschulz.github.io/omics-skills/",
  "repository": "https://github.com/fmschulz/omics-skills",
  "license": "MIT",
  "keywords": [
    "bioinformatics",
    "omics",
    "genomics",
    "literature",
    "scientific-writing",
    "data-visualization"
  ]
}
Contents

What it installs

The manifest is a name and a version. 35 skills, 4 agents travel with it, and installing the plugin installs all of them — 1,543 tokens a session between them. Each is measured on its own page, and each can be installed alone.

Files

What ships with it

1 file beside plugin.json in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 3d ago First seen · 21 lines scan A bb6559bc4225

Subscribe to this mod's changes

omics-skills is a plugin published in the GitHub repository fmschulz/omics-skills (7 stars, last pushed 9d ago), licensed MIT. Its token cost is not measured: this kind of file is read by the harness, not the model. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

ResearchScientificagent-skillsai-agentsbioinformaticsclaude-codeclaude-skillscodex-cli
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