raster

raster is a skill for Claude Code, Codex from LeoLin990405/r-analytics-skill. It costs 24 tokens per session (637 once invoked), scanned A, original, MIT.

An R package for reading, writing, creating, and analysing raster data: a grid of values arranged across geographic space. It is an older package, with terra suggested for new projects.

In plain words
What is it for?
Use it for multi-band raster files, arithmetic, summaries, neighbourhood calculations, coordinate-based extraction, and cropping or masking data.
Why use it?
It gives you ready-made operations for common raster tasks instead of manipulating grid cells and coordinates yourself.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it for multi-band raster files, arithmetic, summaries, neighbourhood calculations, coordinate-based extraction, and cropping or masking data.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/leolin990405/r-analytics-skill/raster
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add LeoLin990405/r-analytics-skill --skill raster
Clone the repo
git clone --depth 1 https://github.com/LeoLin990405/r-analytics-skill

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for raster

README.md
[![agentmods](https://agentmods.dev/badge/skills/leolin990405/r-analytics-skill/raster/github.svg)](https://agentmods.dev/skills/leolin990405/r-analytics-skill/raster)
Your own site
<a href="https://agentmods.dev/skills/leolin990405/r-analytics-skill/raster"><img src="https://agentmods.dev/badge/skills/leolin990405/r-analytics-skill/raster/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for raster

Your own site · 80×15
<a href="https://agentmods.dev/skills/leolin990405/r-analytics-skill/raster"><img src="https://agentmods.dev/badge/skills/leolin990405/r-analytics-skill/raster.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 24 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 637 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00024 $0.00637
Opus 5 $0.00012 $0.00318
Sonnet 5 $0.00005 $0.00127
Haiku 4.5 $0.00002 $0.00064

Measured 9d ago against content hash 9418aa60f6e7, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-12, from the pricing page.

Security

Grade A, and why

raster scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 9d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

sub-skills/r-spatial/r-spatial-raster/raster/SKILL.md · 145 lines

What it actually says

raster

Geographic data analysis and modeling.

Note

Consider using terra for new projects (faster, modern replacement).

Reading/Writing

library(raster)

# Read raster
r <- raster("file.tif")

# Read multi-band
s <- stack("multiband.tif")
b <- brick("multiband.tif")

# Write
writeRaster(r, "output.tif")
writeRaster(r, "output.tif", format = "GTiff")

Create Raster

# Empty raster
r <- raster(nrows = 100, ncols = 100,
  xmn = 0, xmx = 100, ymn = 0, ymx = 100)

# From matrix
r <- raster(matrix(1:100, 10, 10))

# Set values
values(r) <- runif(ncell(r))

Properties

# Dimensions
nrow(r)
ncol(r)
ncell(r)
res(r)

# Extent
extent(r)
xmin(r); xmax(r); ymin(r); ymax(r)

# CRS
crs(r)
projection(r)

Operations

# Arithmetic
r2 <- r * 2
r3 <- r + r2
r4 <- sqrt(r)
r5 <- log(r)

# Cell statistics
cellStats(r, stat = "mean")
cellStats(r, stat = "sum")

# Focal operations
focal(r, w = matrix(1, 3, 3), fun = mean)

Extract Values

# By coordinates
extract(r, cbind(x, y))

# By spatial object
extract(r, points)
extract(r, polygons, fun = mean)

# Get all values
values(r)
getValues(r)

Crop and Mask

# Crop to extent
r_crop <- crop(r, extent_obj)

# Mask by polygon
r_mask <- mask(r, polygon)

# Both
r_clip <- crop(r, polygon)
r_clip <- mask(r_clip, polygon)

Reproject

# Project raster
r_proj <- projectRaster(r, crs = "+proj=utm +zone=10")

# Resample
r_resamp <- resample(r, template_raster)

Stack Operations

# Create stack
s <- stack(r1, r2, r3)

# Stack statistics
mean(s)
sum(s)
calc(s, fun = mean)

# Apply function
overlay(r1, r2, fun = function(x, y) x + y)

Migration to terra

# raster -> terra equivalents
# raster() -> rast()
# stack() -> rast()
# brick() -> rast()
# extent() -> ext()
# crs() -> crs()
# projectRaster() -> project()
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 9d ago First seen · 145 lines · 24 tokens per session scan A 9418aa60f6e7

Subscribe to this mod's changes

raster is a skill published in the GitHub repository LeoLin990405/r-analytics-skill (5 stars, last pushed 6mo ago), licensed MIT. It adds 24 tokens to every session and 637 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

Related

Other skills, from other repositories

bio-applied-molecular-evolution

Test Hardy-Weinberg equilibrium, simulate Wright-Fisher drift/selection, and compute dN/dS, Tajima's D, and Fst with NumPy/SciPy. Use for neutral theory, molecular clock divergence time, selection scans, or effective population size (Ne) questions.

Pavel-Kravchenko/Bioinformatics · 67 tokens

advanced-string-structures

Build tries, Aho-Corasick, and suffix arrays with Kasai LCP to index DNA/text and match many patterns in one pass. Use for genome motif scanning, k-mer indexing, longest-repeat search, or BWA/FM-index groundwork.

Pavel-Kravchenko/Bioinformatics · 55 tokens

ai-science-esm2-embeddings

Generate ESM2 protein embeddings (fair-esm/transformers) and predict structure with ESMFold. Use when embedding sequences, scoring mutations zero-shot, annotating protein function, or doing fast MSA-free structure prediction.

Pavel-Kravchenko/Bioinformatics · 56 tokens

ai-science-geneformer-scgpt

Tokenize scRNA-seq via Geneformer gene-rank or scGPT expression-bin encoding; annotate cell types, simulate in-silico knockouts. Use for foundation-model cell annotation, Geneformer/scGPT tokenization, or perturbation prediction.

Pavel-Kravchenko/Bioinformatics · 60 tokens

ai-science-zero-shot-mutation

Score protein point mutations zero-shot with ESM-1v/ESM-2 masked-LM log-odds, ensembled, benchmarked on ProteinGym DMS. Use when predicting mutation effects, ranking missense variants, scoring VUS fitness with no labels.

Pavel-Kravchenko/Bioinformatics · 63 tokens

bio-applied-advanced-ngs

Assemble genomes de novo: greedy OLC, de Bruijn graph/Eulerian path, N50/L50/NG50 stats, SPAdes/Flye/hifiasm CLI usage. Use when choosing k-mer size, picking an assembler for Illumina/ONT/HiFi reads, or scoring contiguity.

Pavel-Kravchenko/Bioinformatics · 76 tokens