LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R language data analysis and visualization skill. Use when user asks to (1) run R scripts or code, (2) install/update R packages, (3) perform data analysis with R, (4) create visualizations with ggplot2/plotly, (5) statistical analysis, (6) data manipulation with tidyverse/dplyr/data.table. Triggers on keywords like…
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R bioinformatics packages. Use for genomic data analysis, RNA-seq, phylogenetics, and Bioconductor workflows.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R Bioconductor ecosystem for bioinformatics. Use for genomics, proteomics, and bioinformatics analysis.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R Biostrings package for biological sequences. Use for DNA, RNA, and protein sequence manipulation.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R GenomicRanges package for genomic intervals. Use for representing and manipulating genomic coordinates.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R genomics with GenomicRanges, Biostrings. Use for genomic intervals, sequences, and annotations.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R pheatmap package for heatmaps. Use for creating publication-quality heatmaps with clustering.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R seqinr package for biological sequence analysis. Use for reading, writing, and analyzing biological sequences.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R phylogenetics with ape, ggtree. Use for phylogenetic trees and evolutionary analysis.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R ape package for phylogenetic analysis. Use for reading, writing, and analyzing phylogenetic trees.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R phangorn package for phylogenetic analysis. Use for phylogenetic reconstruction and analysis.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R DESeq2 package for RNA-seq analysis. Use for differential expression analysis with negative binomial models.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R RNA-seq analysis with DESeq2, edgeR. Use for differential expression and gene set enrichment.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R edgeR package for RNA-seq analysis. Use for differential expression with negative binomial models.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R limma package for microarray and RNA-seq. Use for linear models in differential expression.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R data manipulation, formats, and database packages. Use for data wrangling with dplyr/data.table, reading files (CSV, Excel, JSON, Arrow), and database connections (SQL, MongoDB, Redis).
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R DBI package for database interface. Use for connecting to and querying databases with a common interface.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R RPostgres package for PostgreSQL databases. Use for PostgreSQL connections with modern DBI interface.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R RSQLite package for SQLite databases. Use for embedded SQLite database connections.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R database packages for SQL and NoSQL. Use for DBI connections, SQL queries, dbplyr, SQLite, PostgreSQL, MySQL, MongoDB, Redis.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R dbplyr package for database backends. Use for dplyr verbs on database tables with lazy evaluation.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R elastic package for Elasticsearch. Use for connecting to Elasticsearch and performing search operations.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R mongolite package for MongoDB. Use for connecting to MongoDB databases and performing CRUD operations.
LeoLin990405/r-analytics-skill
Skill Claude CodeCodex
R odbc package for ODBC database connections. Use for connecting to any ODBC-compatible database.