Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add ShangBioLab/SpatialClaw --skill spatial-morphologygit clone --depth 1 https://github.com/ShangBioLab/SpatialClawWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/shangbiolab/spatialclaw/spatial-morphology)<a href="https://agentmods.dev/skills/shangbiolab/spatialclaw/spatial-morphology"><img src="https://agentmods.dev/badge/skills/shangbiolab/spatialclaw/spatial-morphology/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/shangbiolab/spatialclaw/spatial-morphology"><img src="https://agentmods.dev/badge/skills/shangbiolab/spatialclaw/spatial-morphology.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00023 | $0.00306 |
| Opus 5.5 | $0.00009 | $0.00122 |
| Sonnet 5.5 | $0.00005 | $0.00061 |
| Haiku 4.5 | $0.00002 | $0.00031 |
Grade A, and why
spatial-morphology scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
What it actually says
Spatial Morphology
Spatial Morphology extracts handcrafted or deep image features and links them to spatial expression matrices.
Interface
Python API only. This skill is intentionally not registered for spatialclaw run or other CLI execution routing.
Python API
from skills.spatial._lib.morphology import run_morphology
result = run_morphology(adata, images=None, method="deep_features")
Capabilities
- Handcrafted image features for color, texture, shape, and intensity.
- Deep feature extraction when optional torch/vision dependencies are available.
- Image-expression feature fusion for downstream spatial modeling.
- IHC/IF quantification helpers.
Validation
Covered by tests/spatial/test_library_only_skills.py::test_spatial_morphology_smoke.
What ships with it
1 file beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 1mo ago First seen · 49 lines · 23 tokens per session scan A 0ece568ecbc6
spatial-morphology is a skill published in the GitHub repository ShangBioLab/SpatialClaw (11 stars, last pushed 5mo ago), licensed Apache-2.0. It adds 23 tokens to every session and 306 once invoked, about $0.0001 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
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