Borrowing it
Nothing to install: this file belongs to u9401066/med-paper-assistant. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.
curl -O https://raw.githubusercontent.com/u9401066/med-paper-assistant/master/.claude/skills/pubmed-gene-drug-research/SKILL.mdgit clone --depth 1 https://github.com/u9401066/med-paper-assistantWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/u9401066/med-paper-assistant/pubmed-gene-drug-research)<a href="https://agentmods.dev/skills/u9401066/med-paper-assistant/pubmed-gene-drug-research"><img src="https://agentmods.dev/badge/skills/u9401066/med-paper-assistant/pubmed-gene-drug-research/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/u9401066/med-paper-assistant/pubmed-gene-drug-research"><img src="https://agentmods.dev/badge/skills/u9401066/med-paper-assistant/pubmed-gene-drug-research.svg" alt="Reviewed on agentmods" width="80" height="20"></a>- NVIDIA SkillSpector pass
What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00064 | $0.01303 |
| Opus 5 | $0.00032 | $0.00651 |
| Sonnet 5 | $0.00013 | $0.00261 |
| Haiku 4.5 | $0.00006 | $0.00130 |
Grade A, and why
pubmed-gene-drug-research scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 12d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
Copies of this mod
3 near-identical copies found in the catalogue:
- pubmed-gene-drug-research — 100% identical, 14 lines differ
- pubmed-gene-drug-research — 100% identical, 14 lines differ
- pubmed-gene-drug-research — 100% identical, 14 lines differ
How it starts
The opening of the file, as written. The whole thing — 189 lines — stays where its author put it; the contents beside it link to each section on GitHub.
基因與藥物研究
描述
這個 workflow 用在基因、化合物、藥物與臨床變異查詢。公開 MCP 工具已經收斂成一組新的 NCBI extended 介面：基因用 search_gene / get_gene_details / get_gene_literature，化合物用 search_compound / get_compound_details / get_compound_literature，變異則用 search_clinvar。
觸發條件
- 「這個基因的功能是什麼？」
- 「這個藥物的結構或機轉？」
- 「這個變異的臨床意義？」
- 提到 BRCA1、TP53、CYP2C9、warfarin、PubChem、ClinVar
工具對照
| 主題 | 工具 |
|---|---|
| Gene 搜尋 | search_gene, get_gene_details, get_gene_literature |
| Compound 搜尋 | search_compound, get_compound_details, get_compound_literature |
| Variant / ClinVar | search_clinvar |
| 後續文獻追蹤 | fetch_article_details, unified_search |
Gene 工作流
1. 搜尋基因
search_gene(query="BRCA1", organism="human")
2. 取得基因詳情
get_gene_details(gene_id="672")
3. 取得基因相關文獻
get_gene_literature(gene_id="672", limit=20)
4. 展開 PubMed 細節
fetch_article_details(pmids="12345678,87654321")
get_gene_literature走的是 NCBI curated gene-to-publication links，通常比單純 keyword 搜尋更準。
Compound / Drug 工作流
1. 搜尋化合物
search_compound(query="remimazolam")
2. 取得化合物詳情
get_compound_details(cid="11526795")
3. 取得化合物相關文獻
get_compound_literature(cid="11526795", limit=20)
4. 做更廣泛的機轉或比較搜尋
unified_search(
query="remimazolam mechanism action",
limit=20,
ranking="quality"
)
ClinVar / Variant 工作流
搜尋變異
search_clinvar(query="BRCA1 pathogenic")
search_clinvar(query="NM_007294.4:c.5266dupC")
search_clinvar(query="CYP2C9 drug response")
使用方式重點
- 查 gene-level 臨床意義：
search_clinvar(query="BRCA1 pathogenic") - 查精確變異：用 HGVS，例如
NM_007294.4:c.5266dupC - 查藥物基因體學：用基因 + phenotype，例如
CYP2C9 drug response
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 12d ago First seen · 189 lines · 64 tokens per session scan A bc161092a278
pubmed-gene-drug-research is a skill published in the GitHub repository u9401066/med-paper-assistant (12 stars, last pushed 11d ago), licensed Apache-2.0. It adds 64 tokens to every session and 1,303 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
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