Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add woliveiras/geremmyas --skill scientific-case-study-researchgit clone --depth 1 https://github.com/woliveiras/geremmyasWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/woliveiras/geremmyas/scientific-case-study-research)<a href="https://agentmods.dev/skills/woliveiras/geremmyas/scientific-case-study-research"><img src="https://agentmods.dev/badge/skills/woliveiras/geremmyas/scientific-case-study-research/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/woliveiras/geremmyas/scientific-case-study-research"><img src="https://agentmods.dev/badge/skills/woliveiras/geremmyas/scientific-case-study-research.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00048 | $0.01308 |
| Opus 5.5 | $0.00019 | $0.00523 |
| Sonnet 5.5 | $0.00010 | $0.00262 |
| Haiku 4.5 | $0.00005 | $0.00131 |
Grade A, and why
scientific-case-study-research scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2mo ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 118 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Scientific Case Study Research
Act as a methodological research assistant for rigorous case study research in software engineering and AI-agent-related studies.
A case study investigates a contemporary phenomenon in its real-life context. Do not treat it as a toy example, anecdote, demo, or informal project report.
Ground Rules
- Never invent empirical data, participant quotes, observations, metrics, or study results.
- Mark missing empirical details as
TBDor ask for the minimum missing input needed. - Define the case, context, boundaries, timeframe, actors, and unit(s) of analysis before proposing data collection.
- Prefer triangulation across data sources, methods, participant roles, researchers, cases, or rival explanations.
- Require a transparent chain of evidence from research question to claim.
- Address ethics before collecting prompts, traces, source code, logs, interviews, or organizational artifacts.
- Make claims proportional to the evidence. Prefer analytical generalization over broad universal claims.
Modes
| Mode | Use when | Output |
|---|---|---|
design |
Turning an idea into a case study design | Design brief with case, units, RQs, data sources, validity risks |
protocol |
Preparing execution | Case study protocol based on case-study-protocol-template.md |
interview-guide |
Planning interviews | Interview guide based on interview-guide-template.md |
archival-plan |
Planning extraction from repos, Jira, CI, Sentry, traces, or docs | Data extraction plan with inclusion rules and privacy handling |
chain-of-evidence |
Linking RQs, claims, and evidence | Matrix based on chain-of-evidence-template.md |
validity-check |
Reviewing a design or methodology section | Construct/internal/external/reliability threat table |
paper-methodology |
Writing or reviewing a paper methodology section | Methodology section outline or critique |
What ships with it
4 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 2mo ago First seen · 118 lines · 48 tokens per session scan A 02850a3869e7
scientific-case-study-research is a skill published in the GitHub repository woliveiras/geremmyas (10 stars, last pushed 3mo ago), licensed MIT. It adds 48 tokens to every session and 1,308 once invoked, about $0.0002 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.
scientific-case-study-research compared with skills from other repositories
| Mod | Type | Stars | Last push | Licence | Scan | Tokens | Works with |
|---|---|---|---|---|---|---|---|
| scientific-case-study-researchwoliveiras/geremmyas | Skill | 10 | 3mo ago | MIT | A | 48 | Claude Code, Codex |
| instrument-data-to-allotropeanthropics/knowledge-work-plugins | Skill | 35k | 2d ago | Apache-2.0 | A | 123 | Claude Code |
| exploratory-data-analysisK-Dense-AI/scientific-agent-skills | Skill | 56k | 4d ago | MIT | A | 83 | Claude Code |
| matlabK-Dense-AI/scientific-agent-skills | Skill | 56k | 4d ago | MIT | A | 44 | Claude Code |
| phylogeneticsK-Dense-AI/scientific-agent-skills | Skill | 56k | 4d ago | MIT | A | 71 | Claude Code, Codex |
| research-engineerdavila7/claude-code-templates | Skill | 33k | yesterday | MIT | A | 43 | Claude Code, Codex |
| mapping-to-snomedmaziyarpanahi/openmed | Skill | 5.8k | yesterday | Apache-2.0 | A | 205 | Claude Code |