Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add woliveiras/geremmyas --skill scientific-papergit clone --depth 1 https://github.com/woliveiras/geremmyasWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/woliveiras/geremmyas/scientific-paper)<a href="https://agentmods.dev/skills/woliveiras/geremmyas/scientific-paper"><img src="https://agentmods.dev/badge/skills/woliveiras/geremmyas/scientific-paper/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/woliveiras/geremmyas/scientific-paper"><img src="https://agentmods.dev/badge/skills/woliveiras/geremmyas/scientific-paper.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00046 | $0.02013 |
| Opus 5.5 | $0.00018 | $0.00805 |
| Sonnet 5.5 | $0.00009 | $0.00403 |
| Haiku 4.5 | $0.00005 | $0.00201 |
Grade A, and why
scientific-paper scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2mo ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 144 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Scientific Paper Skill
Complete workflow for empirical SE research: paper creation, deep review, SLR, methodology critique, peer-review simulation, and LaTeX conventions.
Modes of Operation
| Mode | Trigger phrases | What it does |
|---|---|---|
create |
"create paper", "new paper", "paper template", "criar artigo" | Scaffolds paper structure + LaTeX template |
review |
"review paper", "revisar paper", "find errors" | Full structured review: methodology, writing, validity |
critique |
"critique", "metodologia", "methodological errors", "erros metodológicos" | Deep methodology critique using error catalog |
peer-review |
"peer review", "referee report", "simulate reviewer", "parecerista" | Generates structured referee report (Summary / Strengths / Weaknesses / Questions / Recommendation) |
slr |
"systematic review", "SLR", "revisão sistemática", "literature review" | Guides SLR protocol from scratch |
methodology-check |
"check methodology", "rigor", "validity", "research design" | Runs methodology checklist for study type |
data-presentation |
"figures", "tables", "charts", "data viz", "plots", "benchmark results" | Reviews data presentation choices |
bib-validate |
"validate bibliography", "check citations", "missing citations", "bib" | Runs validate-bib.py to catch orphaned \cite{} and missing .bib entries |
Step-by-Step Procedures
Mode: review - Full Paper Review
- Ask for the paper file or content (paper.tex or text paste).
- Load error catalog to identify issues by category.
- Load methodology checklist and run the appropriate checklist for the paper's study type.
- Load threats-to-validity to audit the validity section.
- Load paper-structure to verify completeness of all sections.
- Produce structured output:
- Critical errors (must fix before submission)
- Major concerns (likely desk-reject or major revision)
- Minor issues (polish, clarity, consistency)
- Positive observations (what is done well - important for balance)
- For each issue: location (section/paragraph) → problem → recommended fix.
What ships with it
11 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
- assets/paper-template.tex 12 KB
- assets/slr-protocol-template.md 7.8 KB
- references/data-presentation.md 8.4 KB
- references/error-catalog.md 10 KB
- references/latex-conventions.md 5.9 KB
- references/methodology-checklist.md 8.7 KB
- references/paper-structure.md 7.8 KB
- references/systematic-review-protocol.md 8.8 KB
- references/threats-to-validity.md 8.3 KB
- references/venues.md 7.0 KB
- scripts/validate-bib.py 10.0 KB runs code
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 2mo ago First seen · 144 lines · 46 tokens per session scan A fffd7942bf77
scientific-paper is a skill published in the GitHub repository woliveiras/geremmyas (10 stars, last pushed 3mo ago), licensed MIT. It adds 46 tokens to every session and 2,013 once invoked, about $0.0002 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.
scientific-paper compared with skills from other repositories
| Mod | Type | Stars | Last push | Licence | Scan | Tokens | Works with |
|---|---|---|---|---|---|---|---|
| scientific-paperwoliveiras/geremmyas | Skill | 10 | 3mo ago | MIT | A | 46 | Claude Code, Codex |
| instrument-data-to-allotropeanthropics/knowledge-work-plugins | Skill | 35k | 2d ago | Apache-2.0 | A | 123 | Claude Code |
| exploratory-data-analysisK-Dense-AI/scientific-agent-skills | Skill | 56k | 4d ago | MIT | A | 83 | Claude Code |
| matlabK-Dense-AI/scientific-agent-skills | Skill | 56k | 4d ago | MIT | A | 44 | Claude Code |
| phylogeneticsK-Dense-AI/scientific-agent-skills | Skill | 56k | 4d ago | MIT | A | 71 | Claude Code, Codex |
| research-engineerdavila7/claude-code-templates | Skill | 33k | yesterday | MIT | A | 43 | Claude Code, Codex |
| mapping-to-snomedmaziyarpanahi/openmed | Skill | 5.8k | yesterday | Apache-2.0 | A | 205 | Claude Code |