Research instructions files

1,064 tagged Research, measured the same way as everything else here.

Browse within: model-context-protocol 52ai-tools 29knowledge-base 25academic-research 18obsidian 18academic-writing 17claude-code-plugin 17ai-research 15arxiv 15llm-tools 14skills 14fastmcp 13knowledge-graph 13literature-review 13

coco-search CLAUDE.md

193

VioletCranberry/coco-search

Instructions file

Claude Code instructions for VioletCranberry/coco-search, covering project instructions, project overview, tool routing (mandatory), development setup and prerequisites: docker, uv (python package manager).

not rated 37 today A 8,169 tokens original MIT

strategy-os CLAUDE.md

194

LeanOS-Technologies/strategy-os

Instructions file

Instructions for LeanOS-Technologies/strategy-os, covering strategistos --- system instructions, position in leanos, operating model, system purpose and core flow.

not rated 37 4mo ago A 988 tokens original MIT

ssdeanx/deep-research

Instructions file Gemini CLI

Gemini CLI instructions for ssdeanx/deep-research, covering deep research assistant - project context, project overview, core technologies & architecture, primary framework and ai & ml stack.

not rated 36 +1 11mo ago A 5,611 tokens

zoharbabin/google-researcher-mcp

Instructions file

Claude Code instructions for zoharbabin/google-researcher-mcp, covering claude.md - canonical project context, project overview, quick commands, build & run and testing.

not rated 35 2mo ago A 835 tokens original MIT archived

jurisd AGENTS.md

198

russellbrenner/jurisd

Instructions file CodexOpenCode

AGENTS.md instructions for russellbrenner/jurisd, covering agent instructions for jurisd, purpose, current foundation architecture, command contract rule and mcp surface rule.

not rated 35 yesterday A 625 tokens original Apache-2.0

zongmin-yu/serenity-skills

Instructions file

Instructions for zongmin-yu/serenity-skills, covering serenity guidelines, quick filter, process (after passing the filter), variants and scope.

not rated 34 3mo ago A 737 tokens original MIT

nblm CLAUDE.md

200

magicseek/nblm

Instructions file

Instructions for magicseek/nblm, covering claude.md, ⚠️ iron rule - english output, ⚠️ iron rule - notebooklm usage, project overview and development commands.

not rated 33 6mo ago A 1,925 tokens original MIT

TeneoProtocolAI/teneo-skills

Instructions file

Claude Code instructions for TeneoProtocolAI/teneo-skills, covering claude.md, what is teneo protocol?, amazon — extract product details, google maps — extracts business details and instagram agent — get profile details.

not rated 33 +1 4mo ago A 2,248 tokens

qualixar/skillfortify

Instructions file CodexOpenCode

AGENTS.md instructions for qualixar/skillfortify, covering gitnexus — code intelligence, always do, never do, resources and cli.

not rated 31 +1 1mo ago A 656 tokens

gnosis-mcp CLAUDE.md

203

nicholasglazer/gnosis-mcp

Instructions file

Instructions for nicholasglazer/gnosis-mcp, covering gnosis mcp -- mcp documentation server, architecture, backend protocol, dependencies and tools.

not rated 29 15d ago A 3,017 tokens original MIT

HaowenHou/AgenticResearchWiki

Instructions file CodexOpenCode

Instructions for HaowenHou/AgenticResearchWiki, covering reading docs, reading order, do not read by default, template placeholders and doc-update rules.

not rated 29 5mo ago A 418 tokens original MIT

deeptutor AGENTS.md

205

jiadizhunine/deeptutor

Instructions file CodexOpenCode

Instructions for jiadizhunine/deeptutor, covering deeptutor — academic advisor investigation system, what this repo is, when to trigger, language & region and model capability — choose full or lite.

not rated 29 +2 1mo ago A 3,612 tokens original MIT

ZoFiles CLAUDE.md

206

X1AOX1A/ZoFiles

Instructions file

Instructions for X1AOX1A/ZoFiles, covering claude.md — development guide for zofiles, quick start, what is this, architecture overview and data flow.

not rated 29 +3 3mo ago A 2,420 tokens original MIT

goldfxgraph AGENTS.md

207

michael-chow-arch/goldfxgraph

Instructions file CodexOpenCode

Instructions for michael-chow-arch/goldfxgraph, covering agents.md, 1. project identity, 2. repository layout, 3. openspec rules and 4. superpowers rules.

not rated 28 3mo ago A 3,186 tokens original MIT

PangenomeAI/academic-skills-food-nutrition

Instructions file CodexOpenCode

AGENTS.md instructions for PangenomeAI/academic-skills-food-nutrition, covering what this project is, golden rule — branching, … make changes …, always keep docs current (required in the same change) and releases (automatic on major updates).

not rated 28 5d ago A 2,174 tokens original MIT

estevesjh/mcp-ads-arxiv

Instructions file

Instructions for estevesjh/mcp-ads-arxiv, covering academic research & token optimizer skill, core directives, local-first, pre-flight survey protocol and acquisition order (handled by getpaper).

not rated 28 +1 2mo ago A 1,415 tokens original MIT

erpaval CLAUDE.md

211

theagenticguy/erpaval

Instructions file

Instructions for theagenticguy/erpaval, covering erpaval-plugin, repo structure, version management, tools and hooks.

not rated 28 +1 3mo ago A 562 tokens original MIT

andrewlwn77/google-trends-mcp

Instructions file

Instructions for andrewlwn77/google-trends-mcp, covering claude.md, project overview, commands, development and install dependencies.

not rated 28 +2 1y ago A 835 tokens original MIT

rassi0429/resolink-mcp

Instructions file

Project instructions for Resolink MCP, including development guidance, when to use MCP for research or tests, when to use scripts for production setup, and a component-based format.

not rated 27 +1 7mo ago A 13,332 tokens

clio-kit CLAUDE.md

214

iowarp/clio-kit

Instructions file

Claude Code instructions for iowarp/clio-kit, covering claude.md, project overview, project structure, common development commands and setup & installation.

not rated 26 2d ago A 4,847 tokens original BSD-3-Clause

vbarsoum1/llm-wiki-compiler

Instructions file CodexOpenCode

Instructions for vbarsoum1/llm-wiki-compiler, covering klore — llm knowledge compiler, available commands, when to use and prerequisites.

not rated 26 4mo ago A 371 tokens original MIT

subscope CLAUDE.md

216

dancolta/subscope

Instructions file

Instructions for dancolta/subscope, covering subscope — contributor guide, what this codebase is, file layout, conventions and adding a new pattern skill.

not rated 25 24d ago B 3,399 tokens original MIT

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: