Scientific MCP servers

1,371 tagged Scientific, measured the same way as everything else here.

Browse within: mcp-server 350model-context-protocol 299pipeworx 189bioinformatics 59LLM 45agentic-ai 30ai-tools 26fastmcp 24llm-tools 23cyanheads 19arxiv 18climate 15healthcare 15fastapi 14

nds-mcp

121

fkguo/nds-mcp

MCP server Claude CodeCodexCursor +2

Nuclear Data Services MCP server — offline SQLite-backed nuclear physics data queries. Runs locally from the nds-mcp npm package.

not rated 8 yesterday A tokens not measured

macrostrat

122

blake365/macrostrat-mcp

MCP server Claude CodeCodexCursor +2

Macrostrat MCP Server - Access geological data, rock units, formations, and stratigraphic information worldwide. Runs locally from the macrostrat-mcp npm package.

not rated 8 2mo ago A tokens not measured original MIT

endiagram-mcp

123

dushyant30suthar/endiagram-mcp

MCP server Claude CodeCodexCursor +2

EN Diagram — structural verification for concurrent systems. Pure math, no AI. Runs locally from the @endiagram/mcp npm package.

not rated 8 6mo ago A tokens not measured original MIT

mcp-calc-tools

124

nbiish/mcp-calc-tools

MCP server Claude CodeCodexCursor +2

Advanced calculus, finance, linear algebra, probability, and engineering math tools for AI agents via MCP (Model Context Protocol). Runs locally from the mcp-calc-tools npm package.

not rated 8 5mo ago A tokens not measured

spicelib-mcp

125

lucasgerads/spicelib-mcp

MCP server Claude CodeCodexCursor +2

MCP server for running ngspice simulations via spicelib. Runs locally from the spicelib-mcp Python package.

not rated 8 6mo ago A tokens not measured GPL-3.0

mcp-origin-pro

126

ZHANG-923-ZE/origin-MCP

MCP server Claude CodeCodexCursor +2

MCP server "mcp-origin-pro" as configured in ZHANG-923-ZE/origin-MCP. Runs locally from the mcp-origin-pro Python package.

not rated 8 4mo ago A tokens not measured original MIT

lacuna-research-mcp

127

tiptreesystems/lacuna-research-mcp

MCP server Claude CodeCodexCursor +2

MCP server for Lacuna, a research map for machine learning: search directions, papers, authors, venues, and AI-generated research proposals. Runs locally from the lacuna-research-mcp Python package.

not rated 8 +1 2d ago A tokens not measured original MIT

tle-satellite

128

ivanstan/tle-api

MCP server Claude CodeCodexCursor +2

Access TLE orbital data for thousands of satellites including ISS, Starlink, and Hubble. Remote server at tle.ivanstanojevic.me.

not rated 8 6mo ago A tokens not measured GPL-3.0

swmm-mcp

129

kLabUM/SWMM-MCP-PUB

MCP server Claude CodeCodexCursor +2

MCP server "swmm-mcp" as configured in kLabUM/SWMM-MCP-PUB. Runs locally from the swmm-mcp Python package.

not rated 8 4mo ago A tokens not measured original MIT

mathematica-mcp

130

lars20070/mathematica-mcp

MCP server Claude CodeCodexCursor +2

MCP server for WolframScript. Runs locally from the mathematica_mcp Python package.

not rated 8 8mo ago A tokens not measured original MIT

plant-genomics

131

musharna/plant-genomics-mcp

MCP server Claude CodeCodexCursor +2

Plant genomics MCP — 56 tools across 23 live backends (Ensembl Plants, Phytozome, UniProt, Europe PMC, QuickGO, Planteome, PlantCyc/PMN, g:Profiler, AlphaFold, PDBe, InterPro, JASPAR, ThaleMine, PANTHER, OrthoDB, AraGWAS, 1001 Genomes, BLAST, Gramene, KEGG, STRING, ATTED-II, BAR) for MCP clients. Runs locally from the…

not rated 8 +1 yesterday A tokens not measured original MIT

qgis-mcp

132

kicker315/deepseek_qgis_mcp

MCP server Claude CodeCodexCursor +2

MCP server "qgis-mcp" as configured in kicker315/deepseekqgismcp. Runs locally from the qgis-mcp Python package.

not rated 7 1y ago A tokens not measured

rasdaman-mcp

133

rasdaman/rasdaman-mcp

MCP server Claude CodeCodexCursor +2

MCP server enabling LLM-powered access to multi-dimensional geo-spatial datacubes in rasdaman. Runs locally from the rasdaman-mcp Python package.

not rated 7 2mo ago A tokens not measured original MIT

anndata-mcp

134

biocontext-ai/anndata-mcp

MCP server Claude CodeCodexCursor +2

Allows to retrieve information about an AnnData object via MCP. Runs locally from the anndata-mcp Python package.

not rated 7 7mo ago A tokens not measured original MIT

opentrons-mcp

135

yerbymatey/opentrons-mcp

MCP server Claude CodeCodexCursor +2

MCP server for Opentrons HTTP API documentation and endpoint discovery. Runs locally from the opentrons-mcp npm package.

not rated 7 1y ago A tokens not measured original MIT

pyvista-mcp-server

136

pyvista/pyvista-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server "pyvista-mcp-server" as configured in pyvista/pyvista-mcp-server. Runs locally from the pyvista-mcp-server Python package.

not rated 7 today A tokens not measured original MIT

addgene-mcp

137

longevity-genie/addgene-mcp

MCP server Claude CodeCodexCursor +2

MCP for Addgene - Plasmid Repository API. Runs locally from the addgene-mcp Python package.

not rated 7 1y ago A tokens not measured original MIT

inspirehep-mcp

138

MohamedElashri/inspirehep-mcp

MCP server Claude CodeCodexCursor +2

MCP server for InspireHEP - integrate high-energy physics literature resources with LLMs. Runs locally from the inspirehep-mcp Python package.

not rated 7 8d ago A tokens not measured AGPL-3.0

paper-find-mcp

139

h-lu/paper-find-mcp

MCP server Claude CodeCodexCursor +2

A MCP server for searching and downloading academic papers from multiple sources. Runs locally from the paper-find-mcp Python package.

not rated 7 10mo ago A tokens not measured

galaxy-morphology-mcp

140

weinaike/galaxy_morphology_mcp

MCP server Claude CodeCodexCursor +2

MCP server "galaxy-morphology-mcp" as configured in weinaike/galaxymorphologymcp. Runs locally from the galaxy-morphology-mcp Python package.

not rated 7 today A tokens not measured

qiskit-mcp-server

141

barvhaim/qiskit-mcp-server

MCP server Claude CodeCodexCursor +2

MCP server for Qiskit quantum computing capabilities with circuit serialization utilities. Runs locally from the qiskit-mcp-server Python package.

not rated 7 1y ago A tokens not measured

geotap-mcp-server

142

jcholly/geotap-developer

MCP server Claude CodeCodexCursor +2

MCP server for GeoTap — collect comprehensive environmental data from 80+ US federal sources for any site. One tool, all the data. Runs locally from the geotap-mcp-server npm package.

not rated 7 6mo ago A tokens not measured original MIT

openvsp-mcp

143

Three-Little-Birds/openvsp-mcp

MCP server Claude CodeCodexCursor +2

MCP server "openvsp-mcp" as configured in Three-Little-Birds/openvsp-mcp. Runs locally from the openvsp-mcp Python package.

not rated 7 +1 11mo ago A tokens not measured original MIT

gnomad-mcp

144

koido/gnomad-mcp

MCP server Claude CodeCodexCursor +2

MCP server "gnomad-mcp" as configured in koido/gnomad-mcp. Runs locally from the gnomad-mcp Python package.

not rated 7 9mo ago A tokens not measured original Apache-2.0