gwas-lookup

gwas-lookup is a skill for Claude Code, Codex from ClawBio/ClawBio. It costs 46 tokens per session (1,132 once invoked), scanned A, original, no licence file.

A tool for searching genetic variants across nine genomic databases, including the GWAS Catalog, Open Targets, PheWeb, GTEx, and eQTL Catalogue. These databases contain links between variants, traits, gene activity, and disease research.

In plain words
What is it for?
Use it to look up variant associations, gene-expression evidence, and related results across multiple genomic sources.
Why use it?
It removes the need to query each database separately when investigating a variant.

Skill for Claude CodeCodex

Which agent this was written for is unclear — body not stored (licence); the path alone says nothing.

Part of the clawbio plugin — 98 skills, 4 commands shipped together

Good fit Use it to look up variant associations, gene-expression evidence, and related results across multiple genomic sources.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/clawbio/clawbio/gwas-lookup
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add ClawBio/ClawBio --skill gwas-lookup
Clone the repo
git clone --depth 1 https://github.com/ClawBio/ClawBio

Made for: Claude Code, Codex.

Or install clawbio, the plugin that ships this one along with the rest of its 98 skills, 4 commands.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for gwas-lookup

README.md
[![agentmods](https://agentmods.dev/badge/skills/clawbio/clawbio/gwas-lookup/github.svg)](https://agentmods.dev/skills/clawbio/clawbio/gwas-lookup)
Your own site
<a href="https://agentmods.dev/skills/clawbio/clawbio/gwas-lookup"><img src="https://agentmods.dev/badge/skills/clawbio/clawbio/gwas-lookup/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for gwas-lookup

Your own site · 80×15
<a href="https://agentmods.dev/skills/clawbio/clawbio/gwas-lookup"><img src="https://agentmods.dev/badge/skills/clawbio/clawbio/gwas-lookup.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 46 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,132 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00046 $0.01132
Opus 5 $0.00023 $0.00566
Sonnet 5 $0.00009 $0.00226
Haiku 4.5 $0.00005 $0.00113

Measured 10d ago against content hash 1add53f8a0b3, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

gwas-lookup scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 10d ago.

The scan reads SKILL.md. This mod also ships 18 executable files (gwas_lookup_api/__init__.py, gwas_lookup_api/base_client.py, gwas_lookup_api/ensembl.py, …), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/gwas-lookup/SKILL.md · 123 lines

The source is not reproduced here

A licence we could not identify

The repository carries a LICENSE file, but it is custom or dual enough that GitHub cannot name it and neither can this catalogue. Unknown terms are not permission, so the body is not copied here. Read the licence at the source and decide for yourself.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 10d ago First seen · 123 lines · 46 tokens per session scan A 1add53f8a0b3

Subscribe to this mod's changes

gwas-lookup is a skill published in the GitHub repository ClawBio/ClawBio (1,129 stars, last pushed today), with no licence file. It adds 46 tokens to every session and 1,132 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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