clinical-decision-support

clinical-decision-support is a skill for Claude Code, Codex from K-Dense-AI/scientific-agent-skills. It costs 51 tokens per session (2,906 once invoked), scanned A, original, MIT.

A research-only framework for documenting and evaluating clinical decision-support systems—software that may assist healthcare decisions—using aggregate or synthetic data.

In plain words
What is it for?
Use it for evidence profiles, cohort and survival-analysis plans, aggregate model or biomarker evaluation, privacy documentation, governance materials, and traceable research reports.
Why use it?
It supports transparent evaluation while preventing research artifacts from being mistaken for tools that diagnose people, recommend treatment, or operate at the bedside.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Needs its repository: it runs a file that does not travel with it, so clone the repository first. The line is python tests/run_all.py --isolated clinical-decision-support.

Good fit Use it for evidence profiles, cohort and survival-analysis plans, aggregate model or biomarker evaluation, privacy documentation, governance materials, and traceable research reports.

Compare 6 skills from other repositories ↓
About the project

Scientific Agent Skills is a collection of reusable procedures that give AI agents capabilities for scientific research across areas such as biology, chemistry, medicine, and drug discovery. It is used by researchers and by people building AI scientist workflows with compatible coding agents. The catalogue contains many of the project's skills and supporting instructions.

K-Dense-AI/scientific-agent-skills · 50,453 stars · on GitHub · arxiv.org

Install

Getting it into your agent

It runs from inside its repository, so the clone comes first — what it calls does not travel with the file alone.

Clone the repo
git clone --depth 1 https://github.com/K-Dense-AI/scientific-agent-skills
agentmods
npx agentmods add skills/k-dense-ai/scientific-agent-skills/clinical-decision-support

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for clinical-decision-support

README.md
[![agentmods](https://agentmods.dev/badge/skills/k-dense-ai/scientific-agent-skills/clinical-decision-support/github.svg)](https://agentmods.dev/skills/k-dense-ai/scientific-agent-skills/clinical-decision-support)
Your own site
<a href="https://agentmods.dev/skills/k-dense-ai/scientific-agent-skills/clinical-decision-support"><img src="https://agentmods.dev/badge/skills/k-dense-ai/scientific-agent-skills/clinical-decision-support/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for clinical-decision-support

Your own site · 80×15
<a href="https://agentmods.dev/skills/k-dense-ai/scientific-agent-skills/clinical-decision-support"><img src="https://agentmods.dev/badge/skills/k-dense-ai/scientific-agent-skills/clinical-decision-support.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 51 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 2,906 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • Socket pass 2 Oct 2026
  • Snyk pass 2 Oct 2026
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00051 $0.02906
Opus 5.5 $0.00020 $0.01162
Sonnet 5.5 $0.00010 $0.00581
Haiku 4.5 $0.00005 $0.00291

Measured 14d ago against content hash 05645e4bc5c7, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

clinical-decision-support scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 14d ago.

The scan reads SKILL.md. This mod also ships 8 executable files (scripts/_common.py, scripts/cohort_table_generator.py, scripts/decision_logic_traceability.py, …), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

Origin

Copies of this mod

2 near-identical copies found in the catalogue:

skills/clinical-decision-support/SKILL.md · 259 lines

How it starts

The opening of the file, as written. The whole thing — 259 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Clinical Decision-Support Research and Evaluation

Hard Safety Boundary

This skill produces research, evaluation, documentation, and governance artifacts only.

Never use it to:

  • diagnose or classify a person;
  • recommend, select, sequence, start, stop, or modify treatment;
  • calculate or communicate a patient-specific dose;
  • triage, prioritize, alarm, alert, or determine urgency;
  • make or automate a patient-specific clinical decision;
  • support bedside, point-of-care, or live clinical operation;
  • replace professional judgment or a validated, authorized clinical system;
  • claim FDA authorization, regulatory conformity, HIPAA compliance, or legal compliance.

If a request could affect care for a person, stop the workflow and route the matter to a licensed healthcare professional using locally validated and appropriately authorized systems. Do not redirect to another skill for patient-specific care.

In Scope

  • Intended-use and limitation statements for research artifacts
  • Aggregate cohort table shells with disclosure controls
  • Statistical analysis plans and survival-analysis plan review
  • Aggregate model or biomarker performance evaluation
  • Transparent GRADE evidence-profile checklists
  • Evidence-source and decision-logic traceability
  • De-identification process checklists
  • Fairness, subgroup, calibration, uncertainty, external-validation, monitoring, change-control, audit, and human-factors documentation

Outputs remain drafts until qualified humans approve them. Reporting guidance improves transparency; it does not establish study quality, clinical utility, safety, effectiveness, authorization, or compliance.

Data Gate

Before any script:

  1. Have the responsible human reviewer confirm and document that input is synthetic or aggregate. Scripts cannot establish this from field names or declared metadata.
  2. Reject patient rows, records, narratives, identifiers, free text, dates tied to people, images, waveforms, or genomic sequences.
  3. Keep source files local. Do not fetch URLs, call APIs, read environment variables, or send data to a model.
  4. Set disclosure thresholds before producing tables.
  5. Record provenance, data cut date, population, exclusions, missingness, and transformations.

Read the full file on GitHub · 259 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 14d ago Changed · +2 lines · +1 tokens per session 05645e4bc5c7
  2. 15d ago Changed · +1 lines 4c96a7011920
  3. 1mo ago Changed · +17 lines 721d67393c73
  4. 1mo ago First seen · 239 lines · 50 tokens per session scan A b3c89edd706b

Subscribe to this mod's changes

clinical-decision-support is a skill published in the GitHub repository K-Dense-AI/scientific-agent-skills (50,453 stars, last pushed today), licensed MIT. It adds 51 tokens to every session and 2,906 once invoked, about $0.0002 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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