psi4-single-point-energy

psi4-single-point-energy is a skill for Claude Code, Codex from ma-compbio-lab/SkillFoundry. It costs 43 tokens per session (569 once invoked), scanned A, original, Apache-2.0.

A small Psi4 quantum-chemistry calculation that computes the energy of a water molecule using Hartree-Fock, a basic electronic-structure method.

In plain words
What is it for?
Use it to run a deterministic water-energy smoke test and save the software version, molecule details, method, basis set, and energy as JSON.
Why use it?
It provides a repeatable local check that Psi4 is installed and working before attempting larger or more accurate calculations. It is not intended for production-quality benchmarking.

Skill for Claude CodeCodex

Written for no agent in particular: nothing here depends on one.

Good fit Use it to run a deterministic water-energy smoke test and save the software version, molecule details, method, basis set, and energy as JSON.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add ma-compbio-lab/SkillFoundry --skill psi4-single-point-energy
Clone the repo
git clone --depth 1 https://github.com/ma-compbio-lab/SkillFoundry

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for psi4-single-point-energy

README.md
[![agentmods](https://agentmods.dev/badge/skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy/github.svg)](https://agentmods.dev/skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy)
Your own site
<a href="https://agentmods.dev/skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy"><img src="https://agentmods.dev/badge/skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for psi4-single-point-energy

Your own site · 80×15
<a href="https://agentmods.dev/skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy"><img src="https://agentmods.dev/badge/skills/ma-compbio-lab/skillfoundry/psi4-single-point-energy.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 43 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 569 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00043 $0.00569
Opus 5 $0.00022 $0.00284
Sonnet 5 $0.00009 $0.00114
Haiku 4.5 $0.00004 $0.00057

Measured 10d ago against content hash e500d7dcdcae, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-10, from the pricing page.

Security

Grade A, and why

psi4-single-point-energy scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 10d ago.

The scan reads SKILL.md. This mod also ships 2 executable files (scripts/run_psi4_single_point.py, tests/test_run_psi4_single_point.py), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/computational-chemistry-and-molecular-simulation/psi4-single-point-energy/SKILL.md · 53 lines

How it starts

The opening of the file, as written. The whole thing — 53 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Purpose

Provide a minimal, runnable Psi4 starter that computes one deterministic single-point energy for a bundled water geometry and records the result as compact JSON.

When to use

  • You need a verified local Psi4 entry point.
  • You want a tiny quantum-chemistry smoke calculation before scaling to larger molecules or better methods.
  • You need a deterministic summary that can be tested in CI-like local workflows.

When not to use

  • You need high-accuracy energetics, conformer searches, or production optimizations.
  • You need solvent models, post-HF methods, or large basis sets.

Inputs

  • Optional output JSON path
  • Optional method and basis, defaulting to hf and sto-3g

Outputs

  • JSON summary with Psi4 version, job label, molecule metadata, and single-point energy in Hartree

Requirements

  • slurm/envs/psi4 with Psi4 installed

Procedure

  1. Run slurm/envs/psi4/bin/python skills/computational-chemistry-and-molecular-simulation/psi4-single-point-energy/scripts/run_psi4_single_point.py --out skills/computational-chemistry-and-molecular-simulation/psi4-single-point-energy/assets/water_hf_sto3g_summary.json.
  2. Confirm the output reports psi4_version, method, basis, and a negative energy_hartree.
  3. Reuse the script as a seed for larger Psi4 workflows after validating the dedicated prefix.

Validation

  • The command exits successfully under slurm/envs/psi4/bin/python.
  • The result reports a 3-atom water molecule.
  • The hf/sto-3g energy is reproducible for the bundled geometry.

Failure modes and fixes

  • Missing Psi4 prefix: install or reactivate slurm/envs/psi4.
  • Import failure: confirm the script is run with slurm/envs/psi4/bin/python, not the base interpreter.
  • Numerical drift after edits: reset the geometry, method, basis, and thread count to the bundled defaults.

Safety and limits

  • Educational starter only.
  • The bundled water calculation is intentionally tiny and not suitable for scientific claims by itself.

Read the full file on GitHub · 53 lines

Files

What ships with it

8 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 10d ago First seen · 53 lines · 43 tokens per session scan A e500d7dcdcae

Subscribe to this mod's changes

psi4-single-point-energy is a skill published in the GitHub repository ma-compbio-lab/SkillFoundry (39 stars, last pushed 4mo ago), licensed Apache-2.0. It adds 43 tokens to every session and 569 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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