95 tagged reproducibility, measured the same way as everything else here.
Browse within: MLOps 34machine-learning 34Distributed Computing 33streamlit 33workflow-orchestration 33claude-plugin 16pre-registration 16python 16scientific-computing 13autonomous-laboratory 11lab-automation 11self-driving-labs 11dime 6reproducible-research 6
Skill Claude CodeCodex
Scope the physical and interface design of a laboratory before configuring it. Use when a user asks how to approach a lab buildout, how to break a cell into components, which mechanism or instrument to choose, how to tailor a reference design to their material system or hazards, whether a design is over-engineered, or…
Skill Claude CodeCodex
Inspect the current OpenSDL repository and declared laboratory state. Use when a user asks for current status or needs a declared-state baseline before a concrete task; use start-here for setup planning, inventory changes, or new equipment.
Skill Claude CodeCodex
Establish or resume an OpenSDL laboratory through a normal agent conversation. Use when a user says start here, set up or configure my lab, plan a new lab or cell, describe existing equipment, continue a lab build, or turn a laboratory idea into a simulator-first implementation plan.
Skill Claude CodeCodex
Scan a repository that already has Claude Code configuration (hooks, skills, CLAUDE.md, settings, MCP servers) and package it into a valid MCS techpack.yaml for distribution via mcs. Use this skill whenever the user wants to create a tech pack from an existing repo, convert a Claude Code setup into a shareable MCS…
Skill Claude CodeCodex
Skill "scitex" from scitex-ai/scitex-python, covering scitex — umbrella package, mechanics, sub-skills index, quick reference and mandatory leaves.
Skill Claude CodeCodex
Command-line interface for SciTeX platform operations — 30+ subcommands with lazy loading. Specialization of scitex-cli-convention.
Skill Claude CodeCodex
Add a single new stage to an existing Calkit pipeline. Use when the user invokes /calkit:add-pipeline-stage or asks to add a script, notebook, or command to the pipeline.
Skill Claude CodeCodex
Calkit conventions and foundational context. Load whenever working in a Calkit project—defines calkit.yaml structure, environments, pipeline stages, CLI commands, and version control conventions.
Skill Claude CodeCodex
Convert an existing repo with ad hoc scripts into a fully reproducible Calkit pipeline. Use when the user invokes /calkit:create-pipeline or asks to make a project reproducible end-to-end.
XiansenWu954/IEEE-suite-skills
Skill Claude CodeCodex
Draft IEEE Research Reproducibility data/code availability statements with DOI hosting for IEEE journal submissions.
Skill Claude CodeCodex
Produce deep AGILAB audit and code-review artifacts with evidence-backed findings, mandatory architecture-foundation readiness, blast-radius tracing, security/test posture, and prioritized recommendations. Use when the user says "review AGILAB", "audit AGILAB", "code review AGILAB", "deep review", "architecture…
Skill Claude CodeCodex
Streamlit page authoring patterns for AGILAB (sessionstate safety, keys, rerun, UX).
Skill Claude CodeCodex
Quick, targeted test strategy for AGILAB (core unit tests, app smoke tests, regression).
Skill Claude CodeCodex
ArXivist is a multi-agent orchestration skill that converts scientific papers (arXiv PDFs or URLs) into fully executable, reproducible Git repositories through a structured pipeline. Use this skill whenever a user mentions: converting a paper to code, reproducing a research paper, implementing an arXiv paper, turning…
Skill Claude CodeCodex
Generates rigorous, reproducible Stata data-cleaning workflows that follow World Bank DIME Analytics conventions (iefieldkit, ietoolkit, iefolder DataWork structure, ieboilstart, iecodebook, ieduplicates, iecompdup, extended missing values, master datasets, encryption for PII, dynamic absolute paths). Defaults to…
Skill Claude CodeCodex
Foundational data-discipline skill for econometrics work in any language. Enforces the discipline that every other data, analysis, and writing skill depends on: define the unit of analysis before anything else; treat IDs as a contract; merge with explicit cardinality and validation; never silently change the unit of…
Skill Claude CodeCodex
CRUCIBLE: a Claude-only adversarial expert workshop that stress-tests a scientific paper and then, opt-in, rebuilds it. ACT I (TRIBUNAL): from the paper PDF (plus a few public cited works it fetches), a topic-adapted fleet of expert referee subagents (every contested claim argued from at least two COMPETING…
poplarity/dsh-science-workbench
Skill Claude CodeCodex
A set of rules for running reproducible bioinformatics analyses, which study biological data with software. It uses small self-contained scripts, recorded inputs and outputs, environment details, and version history so results can be repeated.
poplarity/dsh-science-workbench
Skill Claude CodeCodex
Compose one publication-grade multi-panel figure. Entry from a one-line claim + data files, OR from an existing figure via deriveoutlineprompt (you read the PNG). Runs a per-figure loop: outline (12-col grid, per-panel ask + labelbudget) → render each panel with paneltask (loading figure-style), one at a time or…
poplarity/dsh-science-workbench
Skill Claude CodeCodex
Publication-grade figure correctness and legibility rules. Load before drawing any plot and call applyfigurestyle() — sets a role-mapped font-size ladder, outward ticks, frameless legends, and 300-dpi output. The skill is a checklist, not a house look: data fidelity (claim-titles tested against every row, excluded…
SPYfighting/my-academic-skills
Skill Claude CodeCodex
Gated protein design campaign: each expert judgement is a checkpoint a human signs off before compute is spent. Branches: de novo binder design (epitope choice, generation, co-folding ensemble ranking, ranked order sheet); structure and complex prediction with calibrated confidence; protein engineering (stability…
Skill Claude CodeCodex
Use when creating, updating, or reviewing a research figure (plot, chart, brain map, heatmap, schematic) — guides chart-type selection, typography, colorblind-safe palette, layout, and journal-specific export specs. Dispatches a figure-reviewer subagent after rendering. Complements claims-audit (which checks figure…
Skill Claude CodeCodex
Use when running any experiment or analysis — hypothesis and analysis plan must be registered before seeing results, the scientific equivalent of test-driven development.
Skill Claude CodeCodex
Use when writing a research manuscript — guides section-by-section writing with prerequisite gates, citation discipline, number traceability, and per-section subagent review. Activated after experiment results are reviewed and before claims-audit.