public-data-access

public-data-access is a skill for Claude Code, Codex from xuzhougeng/wisp-science. It costs 70 tokens per session (1,508 once invoked), scanned A, original, AGPL-3.0.

A workflow for obtaining public bioinformatics data, such as gene-expression datasets, raw sequencing reads, and release files. It covers sources including GEO, SRA, ENA, TCGA/GDC, GTEx, and DepMap.

In plain words
What is it for?
Use it to plan, configure, validate, and document downloads of public research datasets and their metadata.
Why use it?
It helps plan and verify data downloads without tying the workflow to one provider. It also supports manifests, resumable downloads, and reusable local caches.

Skill for Claude CodeCodex

Which agent this was written for is unclear — body not stored (licence); the path alone says nothing.

Good fit Use it to plan, configure, validate, and document downloads of public research datasets and their metadata.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/xuzhougeng/wisp-science/public-data-access
About the project

xuzhougeng/wisp-science is a local-first desktop workbench for scientific research that combines AI assistants with Python and R computing, literature search, scientific databases, and remote runtimes. Researchers use it to run analyses, manage project artifacts, and preserve evidence and decisions on their own machines. Its catalogue skills and instruction extend the workbench’s reusable agent workflows.

xuzhougeng/wisp-science · 1,118 stars · on GitHub · wispscience.com

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add xuzhougeng/wisp-science --skill public-data-access
Clone the repo
git clone --depth 1 https://github.com/xuzhougeng/wisp-science

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for public-data-access

README.md
[![agentmods](https://agentmods.dev/badge/skills/xuzhougeng/wisp-science/public-data-access/github.svg)](https://agentmods.dev/skills/xuzhougeng/wisp-science/public-data-access)
Your own site
<a href="https://agentmods.dev/skills/xuzhougeng/wisp-science/public-data-access"><img src="https://agentmods.dev/badge/skills/xuzhougeng/wisp-science/public-data-access/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for public-data-access

Your own site · 80×15
<a href="https://agentmods.dev/skills/xuzhougeng/wisp-science/public-data-access"><img src="https://agentmods.dev/badge/skills/xuzhougeng/wisp-science/public-data-access.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 70 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,508 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe. Third-party audits
  • NVIDIA SkillSpector pass 7 Sept 2026
How audits are shown
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00070 $0.01508
Opus 5 $0.00035 $0.00754
Sonnet 5 $0.00014 $0.00302
Haiku 4.5 $0.00007 $0.00151

Measured yesterday against content hash 72bb6c56aaab, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

public-data-access scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured yesterday.

The scan reads SKILL.md. This mod also ships 1 executable file (scripts/public_data_plan.py), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

skills/public-data-access/SKILL.md · 138 lines

The source is not reproduced here

Licensed AGPL-3.0

The repository is licensed AGPL-3.0, which this catalogue does not treat as permission to reproduce the file. Read it at the source.

Read it on GitHub

Files

What ships with it

4 files beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. yesterday Changed · +17 lines · -13 tokens per session 72bb6c56aaab
  2. 10d ago First seen · 121 lines · 83 tokens per session scan A 0c2e3c0aa6b4

Subscribe to this mod's changes

public-data-access is a skill published in the GitHub repository xuzhougeng/wisp-science (1,118 stars, last pushed today), licensed AGPL-3.0. It adds 70 tokens to every session and 1,508 once invoked, about $0.0003 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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