ai4science skills

EvoScientist/EvoScientist

Skill Claude CodeCodex

Helps users discover agent skills from the open ecosystem. Searches skills.sh and presents options for installation via the built-in skillmanager tool.

EvoScientist/EvoScientist

Skill Claude CodeCodex

Create new skills, modify and improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, update or optimize an existing skill, run evals to test a skill, benchmark skill performance with variance analysis, or optimize a skill's description for better triggering accuracy.

xuzhougeng/wisp-science

Skill Claude CodeCodex

A workflow for turning books about concepts, theories, or analysis methods into reusable task instructions. It scans document images, links claims to evidence, and checks the result through human review.

xuzhougeng/wisp-science

Skill Claude CodeCodex

Correctness and legibility checklist for publication figures, plus a matplotlib sidecar. Load before plotting anything and call applyfigurestyle() (role-mapped font ladder, outward ticks, frameless legends, 300-dpi saves, CJK-safe fonts). Covers data fidelity, label budgets, axis/colour/type rules, chart choice by…

xuzhougeng/wisp-science

Skill Claude CodeCodex

Use this skill whenever the user provides a scientific paper PDF and asks for a group-meeting literature report, journal-club slides, 文献汇报PPT, 组会PPT, paper presentation, article walkthrough, or to explain a paper with PowerPoint. The skill first reconstructs the paper's scientific logic, then builds author/background…

EvoScientist/EvoSkills

Skill Claude CodeCodex

Use this skill to produce standalone, publication-ready PNG graphics and reproducible matplotlib scripts from tabular data (CSVs or DataFrames). This tool is built specifically for rendering numerical data into formal scientific visualizations—including scatter, line, bar, pie, ring, bubble, tornado, KDE, violin, box…

EvoScientist/EvoSkills

Skill Claude CodeCodex

Use this skill to map the genealogical lineage and historical progression of a research field. It is designed to visualize the evolutionary path of ideas, showing how technical challenges in earlier works were addressed by subsequent research improvements. The final deliverable is a Markdown file with embedded Mermaid…

EvoScientist/EvoSkills

Skill Claude CodeCodex

Find and read academic papers (S2 + arXiv). Disambiguate ambiguous queries, search by keyword + citation graph + recommendations + snippets, judge relevance against an authored rubric, and read with L1/L2/L3 strategy. Trigger phrases: find papers, search papers, related work, citation analysis, recent advances, read…

harbor-framework/terminal-bench-science

Skill Claude CodeCodex

Convert a Harbor benchmark task from Harbor's shared verifier mode (default) to separate verifier mode. Use when the user asks to "convert this task to separate verifier", "make the verifier run in its own container", or asks about Harbor's separate-verifier environment for a specific task.

harbor-framework/terminal-bench-science

Skill Claude CodeCodex

Review a benchmark task PR — downloads all artifacts, analyzes against the rubric, launches harbor view, and enables interactive review.

harbor-framework/terminal-bench-science

Skill Claude CodeCodex

Propose new rubric criteria based on review findings — creates a branch and PR.

PKU-YuanGroup/OpenAI4S

Skill Claude CodeCodex

ADMET-guided genetic molecule optimization workflow from seed SMILES; use when the agent needs to build or run an RDKit/SA-Score/ADMET-AI GA pipeline for molecule optimization, enforce molecule lineage logs, render optimization-history HTML dashboards, and write candidate triage reports.

PKU-YuanGroup/OpenAI4S

Skill Claude CodeCodex

Predict protein structure for monomers and multimers with AlphaFold2 via the ColabFold runner (Mirdita et al. 2022, github.com/sokrypton/ColabFold; AlphaFold2 Jumper et al. 2021). Reach for this skill to fold a sequence or complex with the AF2/AF2-Multimer evoformer, to validate designed sequences by self-consistency…

PKU-YuanGroup/OpenAI4S

Skill Claude CodeCodex

Score an LLM's biological-protocol reasoning on the BioProBench benchmark: protocol QA, step ordering, error detection, protocol generation, and LLM-judged error reasoning; or generate the responses.

boheling/deltasci

Skill Claude CodeCodex

The grounding layer for AI-assisted research: scan the real prior art around an idea, gauge how crowded or open the gap is, and verify every citation against the source of truth. You (the agent) supply the discovery intelligence — writing search queries, judging relevance, reasoning about the gap — while the…

boheling/deltasci

Skill Claude CodeCodex

Two-perspective co-reasoning for AI4Science hypothesis generation. Runs a structured 4-round dialogue between a domain scientist (parameterized by a domain pack) and an ML engineer, producing a grounded, falsifiable research hypothesis that is honest about the AI's training-distribution edges. Domain-agnostic via…

eamag/papers2dataset

Skill Claude CodeCodex

Build structured datasets from academic papers. Use when the user wants to extract structured data from scientific literature, traverse citation graphs, search OpenAlex for papers, or create datasets from PDFs for research purposes.

onescience-ai/OneSkills

Skill Claude CodeCodex

A task coordinator for OneScience that turns a user’s goal into a tracked plan and assigns parts of the work to suitable specialist tools.

onescience-ai/OneSkills

Skill Claude CodeCodex

A skill for changing PyTorch models to run across multiple devices with pipeline and tensor parallelism. Pipeline parallelism splits model stages between devices, while tensor parallelism splits individual calculations.

onescience-ai/OneSkills

Skill Claude CodeCodex

A resource-search tool for finding reusable OneScience building blocks. It searches a catalogue for the most relevant scientific workflow components and returns their supporting details and usage contracts.

FridrichMethod/awesome-skills

Skill Claude CodeCodex

Multi-perspective academic paper review with dynamic reviewer personas. Runs a 5-seat, role-separated review panel (Journal-Fit Reviewer + 3 peer-review roles + Devil's Advocate) with field-specific expertise; role separation is not a claim of independent error processes. Supports full review, re-review…

FridrichMethod/awesome-skills

Skill Claude CodeCodex

12-agent academic paper writing pipeline. 11 modes (full/plan/outline/revision/revision-coach/abstract/lit-review/format-convert/citation-check/disclosure/rebuttal-audit). 6 paper types, 5 citation formats, bilingual abstracts, LaTeX/DOCX-via-Pandoc/PDF output. Style Calibration + Writing Quality Check + Anti-Patterns…

FridrichMethod/awesome-skills

Skill Claude CodeCodex

Orchestrator for the full academic research pipeline: research -> write -> integrity check -> review -> revise -> re-review -> re-revise -> final integrity check -> finalize. Coordinates deep-research, academic-paper, and academic-paper-reviewer into a seamless 10-stage workflow with mandatory, coverage-bounded…