science research skills

120 tagged science research, measured the same way as everything else here.

Browse within: mcpb 60ai4science 58claude-science 58mit-license 58open-source 58bioskills/atac-seq 12bioskills/causal-genomics 11bioskills/alignment-files 10bioskills/alternative-splicing 9bioskills/alignment 7bioskills/chemoinformatics 5

admet_genetic

01

PKU-YuanGroup/OpenAI4S

Skill Claude CodeCodex

ADMET-guided genetic molecule optimization workflow from seed SMILES; use when the agent needs to build or run an RDKit/SA-Score/ADMET-AI GA pipeline for molecule optimization, enforce molecule lineage logs, render optimization-history HTML dashboards, and write candidate triage reports.

373 2d ago A 63 tokens original MIT

alphafold2

02

PKU-YuanGroup/OpenAI4S

Skill Claude CodeCodex

Predict protein structure for monomers and multimers with AlphaFold2 via the ColabFold runner (Mirdita et al. 2022, github.com/sokrypton/ColabFold; AlphaFold2 Jumper et al. 2021). Reach for this skill to fold a sequence or complex with the AF2/AF2-Multimer evoformer, to validate designed sequences by self-consistency…

373 2d ago A 117 tokens original MIT

bioprobench

03

PKU-YuanGroup/OpenAI4S

Skill Claude CodeCodex

Score an LLM's biological-protocol reasoning on the BioProBench benchmark: protocol QA, step ordering, error detection, protocol generation, and LLM-judged error reasoning; or generate the responses.

373 2d ago A 46 tokens original MIT

fda-database

04

silverstein/claude-scientific-skills-desktop

Skill Claude CodeCodex

Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.

21 5mo ago A 43 tokens original MIT

geo-database

05

silverstein/claude-scientific-skills-desktop

Skill Claude CodeCodex

Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.

21 5mo ago A 47 tokens original MIT

literature-review

06

silverstein/claude-scientific-skills-desktop

Skill Claude CodeCodex

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and…

21 5mo ago A 86 tokens original MIT

infercnvpy-skill

07

sciskillhub/sciskill

Skill Claude CodeCodex

Use this skill for general scRNA-seq CNV analysis with infercnvpy, especially when.

5 2d ago A 44 tokens

sciskillhub

08

sciskillhub/sciskill

Skill Claude CodeCodex

Use when a user needs to find the right skill for a research task, especially when the task can be mapped to Concepts and Theory, Research Capabilities, Methods and Techniques, Software and Tools, Instruments and Equipment, Data and Resources, Workflows, or Standards and Guidelines, or when the research stage belongs…

5 2d ago A 128 tokens