Scientific

16,357 mods in this category, of every kind an agent can take. Each one carries what it costs per session, what the scan found, and whether it is the original.

openpgx-research

625

open-pgx/openpgx

Cursor rule Cursor

Research and create OpenPGx pharmacogenomic/nutrigenomic study JSON files from gene/rsID inputs. Triggers on: create PGx studies, research gene/SNP, add gene to catalog, generate study JSONs, expand OpenPGx database, process TODO-RESEARCH.md, create studies from DNHygia/HeartGenetics/Xcode, or mentions of "openpgx"…

not rated 12 6mo ago A 0 tokens

nice-figures

626

Mapika/nice-figures

Plugin Claude Code

Bundles 1 skill · 183 tokens together

Generate matplotlib figures in a soft-pastel, warm-earth, research-blog visual register — bold sans-serif display titles, scatter overlaid with smoothed trends and shaded confidence bands, signature rounded bars, minimal axes, and '↓better' badges. White background by default (conference-ready), with an opt-in warm…

not rated 12 4mo ago A tokens not measured original MIT

papers-reading-skill

627

AOROM/paperreading

Skill Codex

Evidence-grounded AI research workflow for turning supplied economics, finance, management, and social-science papers or structured records into versioned PaperReading artifacts. Use when Codex must ingest text, Markdown, or a text-based PDF; separate source-grounded claims from researcher analysis; bind findings to…

not rated 12 +1 24d ago A 115 tokens original MIT

plaxis

628

Sompote/plaxisMCP

Skill Claude CodeCodex

Drive PLAXIS 2D V20 via the MCP server in this repo — connect, build geometry/materials/boreholes, set BCs, mesh, configure phases (K0/Plastic/Safety), calculate, and read results. Use when the user asks anything about PLAXIS, embankments, soft clay, factor of safety, settlement, soil materials, boreholes, staged…

not rated 12 6mo ago A 159 tokens

thrml

629

extropic-ai/thrml-skill

Skill Claude CodeCodex

Write correct, idiomatic THRML code, centered on Ising machines and how they are trained. THRML is Extropic's JAX-based GPU simulator for the block Gibbs sampling programs that run natively on Extropic's probabilistic computing hardware. Use this skill whenever the user mentions THRML, Extropic, probabilistic…

not rated 12 +1 5mo ago A 174 tokens

the-thinker0/math-skill

Skill Claude CodeCodex

A routing guide for mathematical analysis in AI research and cryptography. It helps an agent choose the relevant mathematical ideas and checks for a problem.

not rated 12 changed 1mo ago A 163 tokens original MIT

pubchem-mcp-server

631

cyanheads/pubchem-mcp-server

Plugin Claude Code

Bundles 35 skills, 1 MCP server · 2,679 tokens together

Search the PubChem chemical database for compounds, properties, safety data, bioactivity, cross-references, and entity summaries via MCP. STDIO or Streamable HTTP.

not rated 12 +1 changed 9d ago A tokens not measured original Apache-2.0

mne-advanced

632

Exekiel179/MNE-MCP

Skill Claude CodeCodex

Rare / advanced neurophysiology analyses on EEG/MEG/iEEG/fNIRS via MNE — a hub for the less-standard methods that mostly run through mneruncode with an EXTERNAL, OPTIONAL library: EEG microstates (pycrostates), complexity/entropy (antropy / neurokit2), graph & network metrics (networkx / bctpy), aperiodic 1/f…

not rated 12 changed 1mo ago A 294 tokens original MIT

factor-mining-pandaai

633

quantskills/skill-factor-mining-pandaai

Skill Codex

Mine A-share quantitative factors with PandaAI in two modes: AI-led blind discovery using PandaAI data and iterative factor-analysis feedback, or evidence-grounded extraction from papers, reports, PDFs, DOCX files, and text. Use when asked to discover new factors autonomously, translate research formulas into…

not rated 12 3mo ago A 84 tokens GPL-3.0

Sounio-lang/sounio

Skill Claude CodeCodex

Extend Sounio's epistemic types with advanced uncertainty quantification methods, such as confidence intervals, non‑Gaussian distributions, and Dempster‑Shafer evidence combination, positioning the language at the state‑of‑the‑art in measurement science.

not rated 12 changed 1mo ago A SkillSpector: pass 62 tokens original Apache-2.0

cst-python-automation

636

jame-ri/cst2026-skill-mcp

Skill Codex

Use when a user asks about CST Studio Suite or CST-MWS automation, .cst projects, CST-specific antenna/RF simulation setup, editing CST parameters/geometry/ports/boundaries, running CST solvers, reading CST result trees/logs or CST-generated S11/S21/farfield/gain/efficiency results, using CST installed…

not rated 12 2mo ago A 126 tokens

kh6570/HAbedini-qspice-mcp

Skill Claude CodeCodex

Operate the QSpice MCP server from the circuit through the waveform. Discover a circuit. Or author a circuit. Generate a netlist. Run a simulation. Read a waveform. Or measure a waveform. Use this skill at the start of any QSpice task. Use this skill when you are not sure which tool to call. Use this skill to simulate…

not rated 12 changed 12d ago A 118 tokens original

rcsb-mcp

639

rcsb/rcsb-mcp

MCP server Claude CodeCodexCursor +2

An MCP server for interrogating PDB structures — search, inspect, and cross-reference across the RCSB Search, Data, and Sequence Coordinates APIs. Runs locally from the rcsb-mcp Python package.

not rated 12 14d ago A tokens not measured original MIT

biomcp-ts

640

yeyuan98/biomcp-ts

MCP server Claude CodeCodexCursor +2

Biomedical MCP server: genes, variants, trials, literature, patents, optional SQL/R/biowasm tools. Runs locally from the biomcp npm package. Needs 8 environment variables to run.

not rated 12 yesterday A tokens not measured original Apache-2.0

cass-2003/local-workflow-skill

Skill Claude Code

A guide to using AI when drafting and improving scientific papers, while keeping the research question, evidence, and conclusions under the researcher's control.

not rated 12 4mo ago A 45 tokens original MIT

superRA

642

FuZhiyu/superRA

Plugin Claude Code

Bundles 22 skills, 3 hooks · 1,034 tokens together

Disciplined AI Research Assistant for economists: plan-implement-integrate workflow with implementer–reviewer pair, data-analysis discipline, and drift-test-verified integration.

not rated 12 changed 3d ago A tokens not measured original MIT

lbt-mcp

643

LoftyTao/ladybug-tools-mcp

MCP server Claude CodeCodexCursor +2

A FastMCP server for Ladybug Tools workflows. Runs locally from the lbt-mcp Python package.

not rated 12 1mo ago A tokens not measured GPL-3.0

mdpaper

644

u9401066/med-paper-assistant

MCP server Claude CodeCodexCursor +2

One of 6 in mcp.json

MCP server "mdpaper" as configured in u9401066/med-paper-assistant. Runs locally from the ${workspaceFolder} Python package. Needs 2 environment variables to run.

not rated 12 2d ago A tokens not measured original Apache-2.0

dynamo-preprocess

647

aristoteleo/awesome-skill-generate

Skill Claude CodeCodex

Run or adapt dynamo preprocessing with dynamo.preprocessing.Preprocessor, including the recipe branches monocle, seurat, sctransform, pearsonresiduals, and monoclepearsonresiduals. Use when converting or reproducing docs/tutorials/notebooks/100tutorialpreprocess.ipynb, preprocessing an AnnData object for downstream…

not rated 11 7mo ago A 109 tokens original BSD-2-Clause

blas_lapack

648

datathings/marketplace

Plugin Claude Code

Bundles 1 skill · 133 tokens together

Complete CBLAS and LAPACKE C API reference (LAPACK v3.12.1) covering 1284 functions across BLAS Level 1/2/3 vector and matrix operations, linear system solvers, eigenvalue/eigenvector computation, SVD, least squares, matrix factorizations, and auxiliary routines for scientific computing and high-performance numerical…

not rated 11 changed 10d ago A tokens not measured original Apache-2.0

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: