16,357 mods in this category, of every kind an agent can take. Each one carries what it costs per session, what the scan found, and whether it is the original.
Skill Claude Code
A research workflow for systematic literature reviews, which collect and assess published studies on a defined topic. It searches several academic databases, downloads open-access papers, and builds a searchable local collection.
labrinyang/apple-health-analysis
Plugin Claude Code
Bundles 1 skill · 216 tokens together
Clinical-grade Apple Health analysis: 21 statistical methods, 30 disease screenings, 59 papers cited, 35+ SVG charts, EN/ZH support.
Galaxy-Dawn/publication-chart-skill
Skill Claude CodeCodex
This skill should be used when the user asks for a publication-quality scientific figure or table, wants help choosing the right chart for results, needs a paper-ready pubfig>=0.3.0 CLI or pubtab workflow, wants a figure + companion table for a results section, wants an Excel sheet turned into publication-ready LaTeX…
Skill Claude CodeCodex needs its repo
Expert in AMPL solver callbacks via ampls (AMPL Solver Libraries): amplpygurobi, amplpycplex, amplpyxpress, amplpycopt. Use for GenericCallback, lazy constraints, user cuts, subtour elimination, Benders cuts added to the solver matrix, heuristic solution injection, custom stopping criteria, and solve monitoring. Knows…
Skill Claude CodeCodex
Creates publication-quality scientific figures for academic papers using TikZ. Use when creating block diagrams, system architectures, flowcharts, or technical illustrations for papers and theses. Always render a temporary PNG/JPG preview and self-verify visual quality before finalizing figure files.
Skill Claude CodeCodex
Create editable charts, diagrams, figures, posters, or slides from intent, data, or references.
Shoko-official/Claude-Science-System-Prompts
Skill Claude CodeCodex
Conduct rigorous, reproducible multi-step scientific work with literature, databases, local files, Python, R, shell, artifacts, reviewers, and approved compute. Use for evidence synthesis, data or statistical analysis, machine learning, simulation, study design, scientific figures or manuscripts, reproduction audits…
NanxiiChen/wind-simulation-GPU
Skill Claude CodeCodex
Stochastic wind field simulation library (JAX / PyTorch / NumPy) with stationary and nonstationary support. Use this skill whenever working in this repository — it covers both usage (running simulations, benchmarks, validation) and development (architecture, adding backends, modifying the algorithm, config system).…
Plugin Claude Code
Bundles 1 skill, 4 agents · 443 tokens together
Drive a live Rocq/Coq proof session through coqtail-mcp. Bundles the skill (server mechanics + proof recipes) and four named subagents (proof-repair, admitted-filler-deep, axiom-auditor, proof-golfer).
zjgxuzhou-prog/Claude-Research-Menntor
Skill Claude CodeCodex
A Chinese-language research mentor for PhD students working in deep learning and artificial intelligence. It covers research from choosing a topic and designing experiments through writing papers and responding to reviews.
jrgleason/embeddings-demystified
MCP server Claude CodeCodexCursor +2
One of 3 in .mcp.json
MCP server "jupyter" as configured in jrgleason/embeddings-demystified. Runs in Docker (datalayer/jupyter-mcp-server:latest). Needs 2 environment variables to run.
jonasscheid/claude-nfcore-plugin
Plugin Claude Code
Bundles 4 skills, 6 agents, 2 hooks · 529 tokens together
Comprehensive Claude Code plugin for nf-core Nextflow pipeline development. Includes skills for pipeline creation, module management, linting, testing, and release preparation following nf-core best practices.
MCP server Claude CodeCodexCursor +2
Lean BigQuery-only MCP server for PhysioNet datasets. Runs locally from the physionet-mcp Python package.
Plugin Claude Code
Bundles 10 skills · 292 tokens together
AI-native scientific research pipeline. Takes a research goal — optionally with a research paper — and autonomously conducts rigorous, multi-step academic research.
ergenekonyigit/cursor-autoresearch
Skill Claude CodeCodex
Set up and run an autonomous experiment loop for any optimization target. Gathers what to optimize, then starts the loop immediately. Use when asked to "run autoresearch", "optimize X in a loop", "set up autoresearch for X", or "start experiments".
cionHuang/arxiv-translate-skill
Skill Claude CodeCodex
Translate arXiv IDs, arXiv URLs, or academic PDFs into Simplified Chinese side-by-side bilingual PDFs using BabelDOC, with local agent subagents translating extracted JSONL units.
Augmented-Nature/BioOntology-MCP-Server
MCP server Claude CodeCodexCursor +2
MCP server "bioontology-server" as configured in Augmented-Nature/BioOntology-MCP-Server. Runs locally from the bioontology-server npm package.
Skill Claude CodeCodex
Use the local stata-cli command for Stata work on this machine. Trigger this skill when the user wants to bootstrap an AI-ready Stata workspace, write or debug .do files, inspect .dta data, export CSVs, or needs Stata syntax/package guidance while staying inside the local stata-cli workflow.
YuliaNuzhnenko/bioinformatics-agent-skills
Skill Claude CodeCodex
Parses AlphaFold2 PDB files, computes per-residue pLDDT confidence scores, and evaluates Solvent Accessible Surface Area (SASA) of active site pockets.
LGDiMaggio/claude-stwinbox-diagnostics
Skill Claude CodeCodex
WHAT: Generates structured diagnostic reports for machine operators and maintenance technicians, summarizing vibration analysis results with severity levels, fault findings, and actionable maintenance recommendations in clear, non-technical language. WHEN: Use when the user asks to create a report, generate a…
Felpix-Studios/social-science-research
Plugin Claude Code
Bundles 13 skills, 9 agents, 3 hooks · 987 tokens together
Social Science Research gives you the tools and workflows to assist with your research. Ideate on topics, perform literature reviews, analyze data, and have agents peer review your work. Based on Pedro Sant'Anna's workflow.
ducrouxolivier/swiss-ephemeris-mcp-server
MCP server Claude CodeCodexCursor +2
MCP server "swiss-ephemeris-mcp-server" as configured in ducrouxolivier/swiss-ephemeris-mcp-server. Runs locally from the swiss-ephemeris-mcp-server npm package.
qiaomiaojoe/ai-academic-workflow
Skill Claude CodeCodex
An automated literature-review search and screening workflow using OpenAlex, an open database and API for scholarly research, and Zotero, a reference manager.
Plugin Claude Code
Bundles 14 skills, 14 commands · 2,260 tokens together
Analysis skills for UN FAOSTAT food and agriculture data. Country profiles, commodity briefings, trade analysis, climate assessments, and data visualizations. Works with any AI assistant that supports the SKILL.md format.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: