autoresearch
145moedesux/autoresearch-opencode
Skill Claude CodeCodex
Set up and run an autonomous experiment loop for any optimization target. Use when asked to start autoresearch or run experiments.
not rated 198 5mo ago A 27 tokens
Instructions file GitHub Copilot
Copilot instructions for SkBlaz/py3plex, covering github copilot instructions for py3plex, project overview, repository structure, key code patterns and network creation.
not rated 189 5d ago A 2,573 tokens
original MIT
Skill Claude Code
Evaluate research rigor. Assess methodology, experimental design, statistical validity, biases, confounding, evidence quality (GRADE, Cochrane ROB), for critical analysis of scientific claims.
not rated 188
+1 6mo ago A 40 tokens
Agent Claude Code
You execute and monitor code-based experiments. Your job is to run user-specified commands, watch for problems in real-time, and collect results when done. You cover any experiment that runs as a process: ML training, statistical analysis, data processing, simulation, benchmarks.
not rated 185
+3 4mo ago A 0 tokens
Instructions file Claude Code
Instructions for dualverse-ai/station, a project described as: The Station is an open-world multi-agent environment where AI agents pursue autonomous scientific discovery and build a shared literature.
not rated 185
+5 10d ago A 3 tokens
copy · 100% Apache-2.0
BZDmathclub/bzd-math-modeling-skills
Skill Claude CodeCodex
A two-stage audit of mathematical-modeling papers for signs of AI-generated writing and problems in the model or evidence. It produces a marked-up HTML report.
not rated 183
+12 2d ago A 110 tokens
mbse-workflow
151matlab/agent-skills-playground
Skill Claude CodeCodex
Use this skill for guided MBSE work in MATLAB — starting a new project, resuming work mid-workflow on an existing project, or answering orientation questions about how the MBSE skills fit together. Trigger when the user says they want to create, start, or set up a new MBSE project; work on a model-based systems…
not rated 174 24d ago A 119 tokens
marimo-notebook
152Skill Claude CodeCodex
Write a marimo notebook in a Python file in the right format.
not rated 172 17d ago A 19 tokens
original Apache-2.0
Learning-Bayesian-Statistics/baygent-skills
Skill Claude CodeCodex
Opinionated amortized Bayesian workflow with BayesFlow for simulation-based inference (SBI). Contains critical guardrails that agents will usually not apply unprompted — always consult before writing BayesFlow code. Trigger on: simulation-based inference, amortized inference, approximate Bayesian inference, BayesFlow…
not rated 172
changed yesterday A 145 tokens
original MIT
Instructions file CodexOpenCode
AGENTS.md instructions for yusong652/itasca-mcp, covering agents.md, project overview, core architecture, mcp side (src/itascamcp) and bridge side (itasca-mcp-bridge submodule).
not rated 173
+9 today A 1,234 tokens
original MIT
BioTender-max/awesome-bio-agent-skills
Skill Claude CodeCodex
Designs adaptive clinical trials including group-sequential (O'Brien-Fleming, Pocock, Lan-DeMets spending), sample-size re-estimation (blinded Friede-Kieser, unblinded Cui-Hung-Wang, Mehta-Pocock promising zone), seamless Phase 2/3 with treatment-arm selection, population enrichment, and response-adaptive…
not rated 172
+1 2mo ago A 147 tokens
paper-radar
156Skill Claude CodeCodex
Scrape AI papers published by 28 big tech companies and AI labs in a given date window, with institutional attribution (lead vs. participating vs. intern). Use when the user asks "what did big tech publish recently", "what AI research has put out", "run the paper radar", or wants to inventory recent arXiv output by…
not rated 169
+7 4d ago A 98 tokens
cuda-skill
157Skill Claude CodeCodex
Query current NVIDIA CUDA, PTX ISA, Runtime API, Driver API, Programming Guide, Best Practices, Nsight Compute, and Nsight Systems references. Use for direct CUDA C++ or PTX work, and for framework tasks only when they need NVIDIA ISA, API, architecture, or tool facts. Triggers include inline PTX, WMMA, WGMMA, TMA…
not rated 165 28d ago A 127 tokens
original MIT
Skill Claude Code
Fill an paperpush .sub submission file from a directory of manuscript files. Reads the manuscript, title page, figures, and supplements, extracts the submission fields, and writes them into the .sub via the deterministic autofill core. Use when the user wants to auto-populate a venue submission from their files.…
not rated 163 4d ago A 98 tokens
original BSD-2-Clause
Plugin Claude Code
Bundles 1 agent · 163 tokens together
Reasons from separating problem, model, and cost model (comparison, word-RAM, arithmetic, online) through exchange/matroid greedy proofs, subproblem-DAG dynamic programming, max-flow min-cut and Goemans–Williamson primal-dual rounding, Karp–Rabin fingerprinting, competitive ratio and Yao's principle, PTAS/FPTAS…
not rated 165
+3 18d ago A
tokens not measured
original MIT
drug-mmpbsa-gbsa
160learningmatter-mit/AtomisticSkills
Skill Claude CodeCodex
Compute single-trajectory MM-GBSA and / or MM-PBSA binding free energy estimates from a protein-ligand MD trajectory. Two backends: a fast OpenMM GBn2 path (no extra dependencies) and an AmberTools MMPBSA.py path that supports both GB (multiple igb models) and Poisson-Boltzmann PB on the same trajectory.
not rated 161
+2 3d ago A 86 tokens
original MIT
Skill Claude Code ✓ vendor
How to run domain-decomposed (multi-GPU) MLIP simulations with DomainParallel — choose between the halo and graph-partition strategies, author a distributionspec so a bring-your-own model runs under domain decomposition, and write a custom dynamics integrator that stays correct across ranks.
not rated 159 2d ago A 64 tokens
original Apache-2.0
protein-qc
162adaptyvbio/protein-design-skills
Skill Claude CodeCodex
Quality control metrics and filtering thresholds for protein design. Use this skill when: (1) Evaluating design quality for binding, expression, or structure, (2) Setting filtering thresholds for pLDDT, ipTM, PAE, (3) Checking sequence liabilities (cysteines, deamidation, polybasic clusters), (4) Creating multi-stage…
not rated 158
+1 2mo ago A 140 tokens
original MIT
research
163Agent Claude Code
Clean-context diagnosis for planning next experiments.
not rated 159
+1 16d ago A 9 tokens
original Apache-2.0
paper-writing
164Skill Claude CodeCodex
Workflow 3: Full paper writing pipeline. Orchestrates paper-plan → paper-figure → paper-write Markdown drafts → paper-write LaTeX section files → paper-compile → paper-review → formal polish → optional human-style polish → proof/claim/citation audits to go from a narrative report to a polished PDF. Use for /goal-based…
not rated 158 1mo ago A 145 tokens
vdjdb-proofread
165Skill Claude CodeCodex
Run QC scripts on a VDJdb chunk, report every error with a suggested fix, verify the output of previous /extract and /format steps, estimate confidence scores, and flag gaps in current pysrc QC coverage.
not rated 155 11d ago A 50 tokens
AGPL-3.0
Skill Codex
Search arXiv and, when needed, verify external academic sources to update field beliefs and one primary decision through testable propositions, capability frontiers, explicitly labeled mechanism models, technical options, transition theses, five-dimensional maturity, leading indicators, and a restrained bilingual…
not rated 155 25d ago A 90 tokens
Agent Claude Code
Solves process-engineering problems using the NeqSim Java API with proportional depth: quick answer-first calculations, notebook-backed studies, or full reports. Delivers auditable task folders with validation evidence, runner-executed notebooks/scripts, and reports when needed. When NeqSim lacks a needed capability…
not rated 150 today A 73 tokens
original Apache-2.0
manim-skill
168Plugin Claude Code
Bundles 1 skill · 64 tokens together
Claude Code Skill for creating mathematical animations using Manim Community Edition. Plan, code, render, and iterate on 3Blue1Brown-style videos.
not rated 150
+3 7mo ago A
tokens not measured
original MIT
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: