29 tagged autonomous research, measured the same way as everything else here.
Browse within: ai-scientist 16llm-agents 13agent-orchestration 12automated-research 12citation-verification 11multi-agent-debate 11openclaw 11paper-generation 11ai-for-science 5
Agent
FBA simulation agent. Runs standard FBA, parsimonious FBA, Flux Variability Analysis, and gene/reaction knockout simulations using COBRApy. Use after a validated metabolic model is available and the user wants to compute growth rates, flux distributions, or knockout phenotypes.
Agent
Metabolic flux analysis agent. Performs gene essentiality analysis, phenotypic phase plane construction, flux sampling, and subsystem-level pathway analysis. Use after FBA simulations are complete and the user wants deeper phenotypic characterisation or to identify metabolic engineering targets.
Agent
Metabolic phenotype interpretation and publication figure agent. Compares wild-type vs. mutant flux distributions, predicts maximum theoretical product yields, identifies metabolic bottlenecks, and generates publication-quality metabolic maps and charts. Use after flux analysis is complete and the user needs…
Agent Cursor
Score, diagnose, and gate a research report draft for grounded-review. Prefer a model different from the writer when available.
Agent Cursor
Apply reviewer-approved repairs to the research report draft for grounded-review while preserving substance.
Sibyl-Research-Team/AutoResearch-SibylSystem
Agent Claude Code
Sibyl Research System heavy-reasoning agent. Used for deep analysis tasks: synthesis, supervision, editing, critical review, and reflection.
Sibyl-Research-Team/AutoResearch-SibylSystem
Agent Claude Code
Sibyl Research System lightweight agent. Used for quick evaluation tasks: debate roles (optimist, skeptic, strategist), section critique, and cross-critique.
Sibyl-Research-Team/AutoResearch-SibylSystem
Agent Claude Code
Sibyl Research System standard agent. Used for literature research, planning, experiment design, and idea generation.
Agent
Read one arXiv paper in depth, write its wiki note, and emit a deep-lit result JSON.
Agent
Screen experiment plans before implementation, blocking unnecessary scale and meaningless gates.
Agent
Research a topic landscape, generate and select research ideas, and save them under ideas/.
Agent
Coordinate an auditable Researcher AI project from hypothesis through artifact review while enforcing execution and disclosure gates.